RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 AACSQ86V21 672 aa18.02■□□□□ 0.48
USB1-210ENST00000565151 DNAJC18Q9H819 358 aa18.02■□□□□ 0.48
USB1-210ENST00000565151 CPA4Q9UI42 421 aa18.02■□□□□ 0.48
USB1-210ENST00000565151 A0A0G2JLL6 359 aaPredicted RBP18.01■□□□□ 0.47
USB1-210ENST00000565151 CXCL11O14625 94 aa18.01■□□□□ 0.47
USB1-210ENST00000565151 CTNND1O60716 968 aaKnown RBP18.01■□□□□ 0.47
USB1-210ENST00000565151 MAP4K4O95819 1239 aaPredicted RBP18.01■□□□□ 0.47
USB1-210ENST00000565151 PRRT2Q7Z6L0 340 aaPredicted RBP18.01■□□□□ 0.47
USB1-210ENST00000565151 MAPKAPK5Q8IW41 473 aa18.01■□□□□ 0.47
USB1-210ENST00000565151 TGFBRAP1Q8WUH2 860 aa18.01■□□□□ 0.47
USB1-210ENST00000565151 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
USB1-210ENST00000565151 NAV1Q8NEY1 1877 aa18.01■□□□□ 0.47
USB1-210ENST00000565151 BAZ2AQ9UIF9 1905 aaKnown RBP18■□□□□ 0.47
USB1-210ENST00000565151 POTEFA5A3E0 1075 aa18■□□□□ 0.47
USB1-210ENST00000565151 APBB1O00213 710 aa18■□□□□ 0.47
USB1-210ENST00000565151 ECM2O94769 699 aaPredicted RBP18■□□□□ 0.47
USB1-210ENST00000565151 LACTBP83111 547 aaPredicted RBP18■□□□□ 0.47
USB1-210ENST00000565151 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
USB1-210ENST00000565151 PTCH2Q9Y6C5 1203 aa18■□□□□ 0.47
USB1-210ENST00000565151 FLT1P17948 1338 aa17.99■□□□□ 0.47
USB1-210ENST00000565151 CYP2C8P10632 490 aa17.99■□□□□ 0.47
USB1-210ENST00000565151 MS4A1P11836 297 aa17.99■□□□□ 0.47
USB1-210ENST00000565151 ARMC5Q96C12 935 aa17.99■□□□□ 0.47
USB1-210ENST00000565151 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.99■□□□□ 0.47
USB1-210ENST00000565151 PICK1Q9NRD5 415 aa17.99■□□□□ 0.47
USB1-210ENST00000565151 IDH1O75874 414 aaKnown RBP17.98■□□□□ 0.47
USB1-210ENST00000565151 BCRP11274 1271 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 CYP7A1P22680 504 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 METTL16Q86W50 562 aaKnown RBP17.98■□□□□ 0.47
USB1-210ENST00000565151 ERC1Q8IUD2 1116 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 MIGA1Q8NAN2 632 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
USB1-210ENST00000565151 PALD1Q9ULE6 856 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 PLXNB2O15031 1838 aa17.98■□□□□ 0.47
USB1-210ENST00000565151 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
USB1-210ENST00000565151 CAP2P40123 477 aa17.97■□□□□ 0.47
USB1-210ENST00000565151 SLFNL1Q499Z3 407 aa17.97■□□□□ 0.47
USB1-210ENST00000565151 TRIM47Q96LD4 638 aa17.97■□□□□ 0.47
USB1-210ENST00000565151 SAP30BPQ9UHR5 308 aaKnown RBP17.97■□□□□ 0.47
USB1-210ENST00000565151 MYH8P13535 1937 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 BAG3O95817 575 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 EVX2Q03828 476 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 SLC4A8Q2Y0W8 1093 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 GADL1Q6ZQY3 521 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 PI4KBQ9UBF8 816 aa17.96■□□□□ 0.47
USB1-210ENST00000565151 CHGBP05060 677 aa17.95■□□□□ 0.46
USB1-210ENST00000565151 SPP2Q13103 211 aa17.95■□□□□ 0.46
USB1-210ENST00000565151 PDE3AQ14432 1141 aa17.95■□□□□ 0.46
USB1-210ENST00000565151 KIF1BPQ96EK5 621 aa17.95■□□□□ 0.46
USB1-210ENST00000565151 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
USB1-210ENST00000565151 TCRBV5S4A2TA0A5A2 114 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 SMARCA5O60264 1052 aaPredicted RBP17.94■□□□□ 0.46
USB1-210ENST00000565151 PLCG2P16885 1265 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 PSMC4P43686 418 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 HSP90AB4PQ58FF6 505 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 SH3TC2Q8TF17 1288 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 ZNF333Q96JL9 665 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 NOL10Q9BSC4 688 aaKnown RBP17.94■□□□□ 0.46
USB1-210ENST00000565151 BCL11AQ9H165 835 aa17.94■□□□□ 0.46
USB1-210ENST00000565151 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
USB1-210ENST00000565151 IGSF3O75054 1194 aa17.93■□□□□ 0.46
USB1-210ENST00000565151 OSBPP22059 807 aa17.93■□□□□ 0.46
USB1-210ENST00000565151 FASTKD5Q7L8L6 764 aaKnown RBP17.93■□□□□ 0.46
USB1-210ENST00000565151 CLASRPQ8N2M8 674 aaKnown RBP17.93■□□□□ 0.46
USB1-210ENST00000565151 DHX36Q9H2U1 1008 aaKnown RBP17.93■□□□□ 0.46
USB1-210ENST00000565151 GOLIM4O00461 696 aa17.92■□□□□ 0.46
USB1-210ENST00000565151 RAB11FIP3O75154 756 aa17.92■□□□□ 0.46
USB1-210ENST00000565151 PDE6AP16499 860 aa17.92■□□□□ 0.46
USB1-210ENST00000565151 EN2P19622 333 aaPredicted RBP17.92■□□□□ 0.46
USB1-210ENST00000565151 ZNF280CQ8ND82 737 aa17.92■□□□□ 0.46
USB1-210ENST00000565151 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.92■□□□□ 0.46
USB1-210ENST00000565151 AGTPBP1Q9UPW5 1226 aa17.92■□□□□ 0.46
USB1-210ENST00000565151 SLC45A1Q9Y2W3 748 aa17.92■□□□□ 0.46
USB1-210ENST00000565151 HMMRO75330 724 aa17.91■□□□□ 0.46
USB1-210ENST00000565151 GDF11O95390 407 aa17.91■□□□□ 0.46
USB1-210ENST00000565151 HMGCS2P54868 508 aa17.91■□□□□ 0.46
USB1-210ENST00000565151 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
USB1-210ENST00000565151 FOXP4Q8IVH2 680 aaPredicted RBP17.91■□□□□ 0.46
USB1-210ENST00000565151 PARK7Q99497 189 aaKnown RBP17.91■□□□□ 0.46
USB1-210ENST00000565151 SRRDQ9UH36 339 aa17.91■□□□□ 0.46
USB1-210ENST00000565151 GABRQQ9UN88 632 aa17.91■□□□□ 0.46
USB1-210ENST00000565151 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 MYCP01106 439 aaPredicted RBP17.9■□□□□ 0.46
USB1-210ENST00000565151 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
USB1-210ENST00000565151 PLCD1P51178 756 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 SH3D19Q5HYK7 790 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 POTEEQ6S8J3 1075 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 DNAJC2Q99543 621 aaKnown RBP17.9■□□□□ 0.46
USB1-210ENST00000565151 WDR18Q9BV38 432 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 BOLA2Q9H3K6 86 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 ZNF532Q9HCE3 1301 aa17.9■□□□□ 0.46
USB1-210ENST00000565151 SMIM22K7EJ46 135 aa17.89■□□□□ 0.45
USB1-210ENST00000565151 PEX10O60683 326 aa17.89■□□□□ 0.45
USB1-210ENST00000565151 ATP5JP18859 108 aa17.89■□□□□ 0.45
USB1-210ENST00000565151 SLC9C1Q4G0N8 1177 aa17.89■□□□□ 0.45
USB1-210ENST00000565151 SLC9C2Q5TAH2 1124 aa17.89■□□□□ 0.45
USB1-210ENST00000565151 TATDN1Q6P1N9 297 aa17.89■□□□□ 0.45
USB1-210ENST00000565151 PROCA1Q8NCQ7 364 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms