RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
CMTM3-209ENST00000565003 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 FLT1P17948 1338 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 TRIM75PA6NK02 468 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 APBB1O00213 710 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-209ENST00000565003 CYP2C8P10632 490 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 PLCG2P16885 1265 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 CYP7A1P22680 504 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 CTGFP29279 349 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 DYNLL1P63167 89 aaKnown RBP12.25□□□□□ -0.45
CMTM3-209ENST00000565003 ARMC5Q96C12 935 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 DNAJC18Q9H819 358 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 PTCH2Q9Y6C5 1203 aa12.25□□□□□ -0.45
CMTM3-209ENST00000565003 IGSF3O75054 1194 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 HMMRO75330 724 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 CAP2P40123 477 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 GADL1Q6ZQY3 521 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 MAGEB6Q8N7X4 407 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 MIGA1Q8NAN2 632 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 KIF1BPQ96EK5 621 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 PARK7Q99497 189 aaKnown RBP12.24□□□□□ -0.45
CMTM3-209ENST00000565003 PI4KBQ9UBF8 816 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 PALD1Q9ULE6 856 aa12.24□□□□□ -0.45
CMTM3-209ENST00000565003 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
CMTM3-209ENST00000565003 KIF22Q14807 665 aa12.23□□□□□ -0.45
CMTM3-209ENST00000565003 ARHGEF6Q15052 776 aa12.23□□□□□ -0.45
CMTM3-209ENST00000565003 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
CMTM3-209ENST00000565003 CLASRPQ8N2M8 674 aaKnown RBP12.23□□□□□ -0.45
CMTM3-209ENST00000565003 ZNF333Q96JL9 665 aa12.23□□□□□ -0.45
CMTM3-209ENST00000565003 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
CMTM3-209ENST00000565003 DHX36Q9H2U1 1008 aaKnown RBP12.23□□□□□ -0.45
CMTM3-209ENST00000565003 SAP30BPQ9UHR5 308 aaKnown RBP12.23□□□□□ -0.45
CMTM3-209ENST00000565003 HERC5Q9UII4 1024 aaKnown RBP12.23□□□□□ -0.45
CMTM3-209ENST00000565003 PDE4DIPQ5VU43 2346 aa12.23□□□□□ -0.45
CMTM3-209ENST00000565003 KIAA0100Q14667 2235 aaKnown RBP12.22□□□□□ -0.45
CMTM3-209ENST00000565003 BCRP11274 1271 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 PSMC4P43686 418 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 JAG1P78504 1218 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 MAP3K12Q12852 859 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 SPP2Q13103 211 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 PDE3AQ14432 1141 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
CMTM3-209ENST00000565003 SLC4A8Q2Y0W8 1093 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 TREML2Q5T2D2 321 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 METTL16Q86W50 562 aaKnown RBP12.22□□□□□ -0.45
CMTM3-209ENST00000565003 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 AGTPBP1Q9UPW5 1226 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 SLC45A1Q9Y2W3 748 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 LOC285556D6RIA3 1793 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 RBBP6Q7Z6E9 1792 aaKnown RBP12.22□□□□□ -0.45
CMTM3-209ENST00000565003 CENPFP49454 3210 aa12.22□□□□□ -0.45
CMTM3-209ENST00000565003 RAB11FIP3O75154 756 aa12.21□□□□□ -0.45
CMTM3-209ENST00000565003 GNRH1P01148 92 aa12.21□□□□□ -0.45
CMTM3-209ENST00000565003 IFIT2P09913 472 aaKnown RBP12.21□□□□□ -0.45
CMTM3-209ENST00000565003 ZNF280CQ8ND82 737 aa12.21□□□□□ -0.45
CMTM3-209ENST00000565003 SH3TC2Q8TF17 1288 aa12.21□□□□□ -0.45
CMTM3-209ENST00000565003 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
CMTM3-209ENST00000565003 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
CMTM3-209ENST00000565003 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.46
CMTM3-209ENST00000565003 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 BRCA2P51587 3418 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 USP17L5A8MUK1 530 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 GOLIM4O00461 696 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 GDF11O95390 407 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 FMNL1O95466 1100 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 OSBPP22059 807 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 HMGCS2P54868 508 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 CERS3Q8IU89 383 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 FOXP4Q8IVH2 680 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 CRACR2BQ8N4Y2 399 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 RIOK1Q9BRS2 568 aaKnown RBP12.2□□□□□ -0.46
CMTM3-209ENST00000565003 SRRDQ9UH36 339 aa12.2□□□□□ -0.46
CMTM3-209ENST00000565003 MYH1P12882 1939 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 MYCP01106 439 aaPredicted RBP12.19□□□□□ -0.46
CMTM3-209ENST00000565003 HLA-DOAP06340 250 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 PDE6AP16499 860 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 USP5P45974 858 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 PRMT2P55345 433 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 TTF1Q15361 905 aaPredicted RBP12.19□□□□□ -0.46
CMTM3-209ENST00000565003 TMED8Q6PL24 325 aaPredicted RBP12.19□□□□□ -0.46
CMTM3-209ENST00000565003 PROCA1Q8NCQ7 364 aaPredicted RBP12.19□□□□□ -0.46
CMTM3-209ENST00000565003 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
CMTM3-209ENST00000565003 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 MGAMO43451 1857 aa12.19□□□□□ -0.46
CMTM3-209ENST00000565003 MYPNQ86TC9 1320 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 TCRBV5S4A2TA0A5A2 114 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 ASNSP08243 561 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 EN2P19622 333 aaPredicted RBP12.18□□□□□ -0.46
CMTM3-209ENST00000565003 FCGRTP55899 365 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 PRKCZQ05513 592 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 MTMR2Q13614 643 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
CMTM3-209ENST00000565003 SLC9C2Q5TAH2 1124 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms