RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 ADAMTS12P58397 1594 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 ABCC11Q96J66 1382 aa7.08□□□□□ -1.28
PTPN9-204ENST00000564970 UGGT2Q9NYU1 1516 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 TTI1O43156 1089 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 SMIM24O75264 130 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 FLOT1O75955 427 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 URI1O94763 535 aaPredicted RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 TRIM37O94972 964 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 EIF2S1P05198 315 aaKnown RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 XBP1P17861 261 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 ACADVLP49748 655 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 CCT8P50990 548 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 CHMP4BP1P59074 171 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 ADCY1Q08828 1119 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 SNX1Q13596 522 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 PKP1Q13835 747 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 MAP7Q14244 749 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 STX1AQ16623 288 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 INF2Q27J81 1249 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 LACTB2Q53H82 288 aaPredicted RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 NAA16Q6N069 864 aaPredicted RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 PRPF40BQ6NWY9 871 aaKnown RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 LMNTD2Q8IXW0 634 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 FUKQ8N0W3 1084 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 STK11IPQ8N1F8 1099 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 ZBTB8BQ8NAP8 495 aaPredicted RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 SMC1BQ8NDV3 1235 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 TRPC4APQ8TEL6 797 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 WHAMMQ8TF30 809 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 SH3GL2Q99962 352 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 EIF2AQ9BY44 585 aaKnown RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 MIS12Q9H081 205 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 TNMDQ9H2S6 317 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 SENP2Q9HC62 589 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 RGS17Q9UGC6 210 aaPredicted RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 TTLL3Q9Y4R7 772 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 EIF2AK4Q9P2K8 1649 aaKnown RBP7.07□□□□□ -1.28
PTPN9-204ENST00000564970 C9orf84Q5VXU9 1444 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 CDC42BPAQ5VT25 1732 aa7.07□□□□□ -1.28
PTPN9-204ENST00000564970 FANCAO15360 1455 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 GPR75-ASB3A0A0A6YYF3 556 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 TMEM110-MUSTN1A8MSY1 372 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 BIN1O00499 593 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 WNT7AO00755 349 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 NDUFAB1O14561 156 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 ARHGAP6O43182 974 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 PRPF3O43395 683 aaKnown RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 PARP1P09874 1014 aaKnown RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 TOP1P11387 765 aaKnown RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 CPA3P15088 417 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 PDCP20941 246 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 PPP2R1AP30153 589 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 HOXA10P31260 410 aaPredicted RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 ARPC4P59998 168 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 KIF5AQ12840 1032 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 FOXD4Q12950 439 aaPredicted RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 SPIDRQ14159 915 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 PABPC1LQ4VXU2 614 aaKnown RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 NBPF14Q5TI25 921 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 BICDL1Q6ZP65 573 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC121Q6ZUS5 278 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 MAATS1Q7Z4T9 603 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 TMEM110Q86TL2 294 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 KIAA0825Q8IV33 1275 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 CCDC13Q8IYE1 715 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 ZGPATQ8N5A5 531 aaKnown RBP7.06□□□□□ -1.28
PTPN9-204ENST00000564970 KLHDC4Q8TBB5 520 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 MAIP1Q8WWC4 291 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 SLC35B4Q969S0 331 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 CGREF1Q99674 301 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 CLSTN2Q9H4D0 955 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 ANO10Q9NW15 660 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 MIS18AQ9NYP9 233 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 WDR35Q9P2L0 1181 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 MYO1AQ9UBC5 1043 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 HDAC6Q9UBN7 1215 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 SSX2IPQ9Y2D8 614 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 ASB3Q9Y575 518 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 PTPRTO14522 1441 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 IQGAP2Q13576 1575 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 EFCAB6Q5THR3 1501 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 ASXL1Q8IXJ9 1541 aa7.06□□□□□ -1.28
PTPN9-204ENST00000564970 AK9Q5TCS8 1911 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 MED14O60244 1454 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 NRXN1Q9ULB1 1477 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 GIGYF1O75420 1035 aaPredicted RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 ZNF189O75820 626 aaPredicted RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 F13A1P00488 732 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 GNAT1P11488 350 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 RPL17P18621 184 aaKnown RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 CCND1P24385 295 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 KRT9P35527 623 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 SERPINB8P50452 374 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 HDAC4P56524 1084 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 KRT85P78386 507 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 SULT2A1Q06520 285 aa7.05□□□□□ -1.28
PTPN9-204ENST00000564970 IFI16Q16666 785 aaKnown RBP7.05□□□□□ -1.28
PTPN9-204ENST00000564970 ANO6Q4KMQ2 910 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms