RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ZNF280AP59817 542 aaPredicted RBP13.19□□□□□ -0.3
SF3B3-205ENST00000564899 ALX1Q15699 326 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
SF3B3-205ENST00000564899 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 KCNB2Q92953 911 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
SF3B3-205ENST00000564899 CYP21A2P08686 494 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 USP17L8P0C7I0 530 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 USP5P45974 858 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 RHBDL3P58872 404 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 TEX11Q8IYF3 940 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 OGFOD1Q8N543 542 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 KIF2CQ99661 725 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 ATP8A2Q9NTI2 1148 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 FZD1Q9UP38 647 aa13.18□□□□□ -0.3
SF3B3-205ENST00000564899 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 GPR25O00155 361 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 RABEP1Q15276 862 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 APOBEC3HQ6NTF7 200 aaKnown RBP13.17□□□□□ -0.3
SF3B3-205ENST00000564899 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 DCP1AQ9NPI6 582 aaPredicted RBP13.17□□□□□ -0.3
SF3B3-205ENST00000564899 USP40Q9NVE5 1235 aa13.17□□□□□ -0.3
SF3B3-205ENST00000564899 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
SF3B3-205ENST00000564899 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 ZNF213O14771 459 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 HAND2P61296 217 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 KRT32Q14532 448 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 HABP4Q5JVS0 413 aaKnown RBP13.16□□□□□ -0.3
SF3B3-205ENST00000564899 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 TGFBRAP1Q8WUH2 860 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
SF3B3-205ENST00000564899 MYOZ2Q9NPC6 264 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 PCDHAC2Q9Y5I4 1007 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 TAF6LQ9Y6J9 622 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 CEP290O15078 2479 aa13.16□□□□□ -0.3
SF3B3-205ENST00000564899 PSMA5P28066 241 aa13.15□□□□□ -0.3
SF3B3-205ENST00000564899 MMP14P50281 582 aa13.15□□□□□ -0.3
SF3B3-205ENST00000564899 CAP1Q01518 475 aa13.15□□□□□ -0.3
SF3B3-205ENST00000564899 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
SF3B3-205ENST00000564899 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
SF3B3-205ENST00000564899 MAPKAPK5Q8IW41 473 aa13.15□□□□□ -0.3
SF3B3-205ENST00000564899 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
SF3B3-205ENST00000564899 FLT1P17948 1338 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 TM4SF4P48230 202 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 PPARAQ07869 468 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 PRKG1Q13976 671 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
SF3B3-205ENST00000564899 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 TBC1D10CQ8IV04 446 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
SF3B3-205ENST00000564899 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 USP17L21D6R901 530 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 E7EWF7 191 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 FKBP1BP68106 108 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 PICALMQ13492 652 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 PKN2Q16513 984 aaKnown RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 MTMR14Q8NCE2 650 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 PRMT6Q96LA8 375 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 UPF3BQ9BZI7 483 aaKnown RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 TM6SF1Q9BZW5 370 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
SF3B3-205ENST00000564899 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
SF3B3-205ENST00000564899 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 ST18O60284 1047 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 CYP2D6P10635 497 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 NEK4P51957 841 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-205ENST00000564899 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
SF3B3-205ENST00000564899 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
SF3B3-205ENST00000564899 SSC5DA1L4H1 1573 aa13.11□□□□□ -0.31
SF3B3-205ENST00000564899 A0A0C4DFX4 3053 aa13.11□□□□□ -0.31
SF3B3-205ENST00000564899 CLRN2A0PK11 232 aa13.11□□□□□ -0.31
SF3B3-205ENST00000564899 WNT10BO00744 389 aa13.11□□□□□ -0.31
SF3B3-205ENST00000564899 MYO1BO43795 1136 aa13.11□□□□□ -0.31
SF3B3-205ENST00000564899 FKTNO75072 461 aa13.11□□□□□ -0.31
SF3B3-205ENST00000564899 POLR3DP05423 398 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms