RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	SH3BP5L	Q7L8J4	393 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	TTC6	Q86TZ1	520 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	METTL16	Q86W50	562 aa	Known RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	JAKMIP1	Q96N16	626 aa	Known RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	CNNM2	Q9H8M5	875 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	VEZT	Q9HBM0	779 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	ZSWIM6	Q9HCJ5	1215 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	SAP30BP	Q9UHR5	308 aa	Known RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	TACC3	Q9Y6A5	838 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	ASTN2	O75129	1339 aa	Predicted RBP	11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	WDR19	Q8NEZ3	1342 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	DDTL	A6NHG4	134 aa	Predicted RBP	11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	TCP10L2	B9ZVM9	353 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	HLA-DOA	P06340	250 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	EPHX2	P34913	555 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	TNNI2	P48788	182 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	PLCD1	P51178	756 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	CTDSPL2	Q05D32	466 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	RBM26	Q5T8P6	1007 aa	Known RBP	11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	MFSD6	Q6ZSS7	791 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	ZFPM1	Q8IX07	1006 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	NCOA7	Q8NI08	942 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	ZC3H15	Q8WU90	426 aa	Known RBP	11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	NEK1	Q96PY6	1258 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	GGA3	Q9NZ52	723 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	SERPINB13	Q9UIV8	391 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	RBM19	Q9Y4C8	960 aa	Known RBP	11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	PPP2R3B	Q9Y5P8	575 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	PLIN4	Q96Q06	1357 aa		11.66	□□□□□ -0.54
SIN3A-205	ENST00000564778	MYH8	P13535	1937 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	GREB1L	Q9C091	1923 aa	Predicted RBP	11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	CAST	P20810	708 aa	Known RBP	11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	RPS6KB1	P23443	525 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	APLP1	P51693	650 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	PDE4B	Q07343	736 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	TCP10	Q12799	353 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	ANGEL2	Q5VTE6	544 aa	Known RBP	11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	BLOC1S2	Q6QNY1	142 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	RUFY3	Q7L099	469 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	RALYL	Q86SE5	291 aa	Known RBP	11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	TEPSIN	Q96N21	525 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	TTC14	Q96N46	770 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	KRT23	Q9C075	422 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	DNAJC18	Q9H819	358 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	PI4KB	Q9UBF8	816 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	SWAP70	Q9UH65	585 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	CYP46A1	Q9Y6A2	500 aa		11.65	□□□□□ -0.54
SIN3A-205	ENST00000564778	MAP3K10	Q02779	954 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	TRDN	Q13061	729 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	COL9A3	Q14050	684 aa	Predicted RBP	11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	RASA3	Q14644	834 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	DHX32	Q7L7V1	743 aa	Known RBP	11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	PNMA8A	Q86V59	439 aa	Predicted RBP	11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	FBXL16	Q8N461	479 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	DYNLL2	Q96FJ2	89 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	CSRNP1	Q96S65	589 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	MTA3	Q9BTC8	594 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	UPF3B	Q9BZI7	483 aa	Known RBP	11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	TMEM39B	Q9GZU3	492 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	ZNF287	Q9HBT7	754 aa		11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778	HERC5	Q9UII4	1024 aa	Known RBP	11.64	□□□□□ -0.55
SIN3A-205	ENST00000564778		B4E1Z4	1266 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	TBC1D12	O60347	775 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	MCM5	P33992	734 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	SHMT1	P34896	483 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	CDK8	P49336	464 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	ANTXR2	P58335	489 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	EXOSC10	Q01780	885 aa	Known RBP	11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	SLC4A8	Q2Y0W8	1093 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	LDHD	Q86WU2	507 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	SLC44A5	Q8NCS7	719 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	NKX2-3	Q8TAU0	364 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	ESR2	Q92731	530 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	SNX21	Q969T3	373 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	AGXT2	Q9BYV1	514 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	DEFB129	Q9H1M3	183 aa		11.63	□□□□□ -0.55
SIN3A-205	ENST00000564778	SSC5D	A1L4H1	1573 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	POLR2A	P24928	1970 aa	Known RBP	11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	ST18	O60284	1047 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	KDM4A	O75164	1064 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	PRDM1	O75626	825 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	CPA1	P15085	419 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	RASA1	P20936	1047 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	NEK4	P51957	841 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	CHADL	Q6NUI6	762 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	TATDN1	Q6P1N9	297 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	CDAN1	Q8IWY9	1227 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	INCENP	Q9NQS7	918 aa		11.62	□□□□□ -0.55
SIN3A-205	ENST00000564778	PRC1	O43663	620 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	ANP32A	P39687	249 aa	Known RBP	11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	EAPP	Q56P03	285 aa	Predicted RBP	11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	CYB5R4	Q7L1T6	521 aa		11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	DCPS	Q96C86	337 aa	Known RBP	11.61	□□□□□ -0.55
SIN3A-205	ENST00000564778	HOOK2	Q96ED9	719 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms