RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 SMIM5Q71RC9 77 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 METTL16Q86W50 562 aaKnown RBP25.76■■□□□ 1.71
SPSB3-206ENST00000564709 WASF1Q92558 559 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 NID2Q14112 1375 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 CUTAO60888 179 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 ZNF654Q8IZM8 581 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 CDC5LQ99459 802 aaKnown RBP25.76■■□□□ 1.71
SPSB3-206ENST00000564709 TUBE1Q9UJT0 475 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 MYH6P13533 1939 aa25.76■■□□□ 1.71
SPSB3-206ENST00000564709 MAGEB6P1A0A0J9YX57 407 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 ATP1A3P13637 1013 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 TPM4P67936 248 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 GRIN1Q05586 938 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 NR5A1Q13285 461 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 UBAC1Q9BSL1 405 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 MYH2Q9UKX2 1941 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 CYP2D7A0A087X1C5 515 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 NUTM2BA6NNL0 878 aaPredicted RBP25.75■■□□□ 1.71
SPSB3-206ENST00000564709 SMTNL1A8MU46 457 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 NUTM2EB1AL46 878 aaPredicted RBP25.75■■□□□ 1.71
SPSB3-206ENST00000564709 FOXN1O15353 648 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 SAFBQ15424 915 aaKnown RBP eCLIP25.75■■□□□ 1.71
SPSB3-206ENST00000564709 BICDL1Q6ZP65 573 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 NUTM2AQ8IVF1 878 aaPredicted RBP25.75■■□□□ 1.71
SPSB3-206ENST00000564709 BCL11BQ9C0K0 894 aaPredicted RBP25.75■■□□□ 1.71
SPSB3-206ENST00000564709 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.75■■□□□ 1.71
SPSB3-206ENST00000564709 KCNH3Q9ULD8 1083 aa25.75■■□□□ 1.71
SPSB3-206ENST00000564709 DYNLL1P63167 89 aaKnown RBP25.74■■□□□ 1.71
SPSB3-206ENST00000564709 CEP135Q66GS9 1140 aa25.74■■□□□ 1.71
SPSB3-206ENST00000564709 ANKRD18AQ8IVF6 992 aa25.74■■□□□ 1.71
SPSB3-206ENST00000564709 CRACR2BQ8N4Y2 399 aaPredicted RBP25.74■■□□□ 1.71
SPSB3-206ENST00000564709 RNF41Q9H4P4 317 aaPredicted RBP25.74■■□□□ 1.71
SPSB3-206ENST00000564709 KRI1Q8N9T8 703 aaKnown RBP25.74■■□□□ 1.71
SPSB3-206ENST00000564709 CNNM3Q8NE01 707 aa25.74■■□□□ 1.71
SPSB3-206ENST00000564709 OSBPL5Q9H0X9 879 aaPredicted RBP25.74■■□□□ 1.71
SPSB3-206ENST00000564709 HSD3B7Q9H2F3 369 aa25.74■■□□□ 1.71
SPSB3-206ENST00000564709 ZNF652Q9Y2D9 606 aa25.74■■□□□ 1.71
SPSB3-206ENST00000564709 THRAP3Q9Y2W1 955 aaKnown RBP25.74■■□□□ 1.71
SPSB3-206ENST00000564709 TNKSO95271 1327 aa25.74■■□□□ 1.71
SPSB3-206ENST00000564709 FAM237AA0A1B0GTK4 181 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 ZNF804BA4D1E1 1349 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 CTIFO43310 598 aaKnown RBP25.73■■□□□ 1.71
SPSB3-206ENST00000564709 ATP2B1P20020 1258 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 GSDMDP57764 484 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 CACNA1SQ13698 1873 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 FANCBQ8NB91 859 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 OXER1Q8TDS5 423 aa25.73■■□□□ 1.71
SPSB3-206ENST00000564709 FANCCQ00597 558 aa25.72■■□□□ 1.71
SPSB3-206ENST00000564709 ARMCX5Q6P1M9 558 aa25.72■■□□□ 1.71
SPSB3-206ENST00000564709 KRBA2Q6ZNG9 492 aa25.72■■□□□ 1.71
SPSB3-206ENST00000564709 COL5A3P25940 1745 aaPredicted RBP25.72■■□□□ 1.71
SPSB3-206ENST00000564709 DEXIO95424 95 aa25.72■■□□□ 1.71
SPSB3-206ENST00000564709 FOXP4Q8IVH2 680 aaPredicted RBP25.72■■□□□ 1.71
SPSB3-206ENST00000564709 PCDHB6Q9Y5E3 794 aa25.72■■□□□ 1.71
SPSB3-206ENST00000564709 IMPACTQ9P2X3 320 aa25.71■■□□□ 1.71
SPSB3-206ENST00000564709 hCG_1642624A0A1W2PR95 340 aa25.71■■□□□ 1.71
SPSB3-206ENST00000564709 PRDM1O75626 825 aa25.71■■□□□ 1.71
SPSB3-206ENST00000564709 CCAR2Q8N163 923 aaKnown RBP25.71■■□□□ 1.71
SPSB3-206ENST00000564709 LINC00116Q8NCU8 138 aa25.71■■□□□ 1.71
SPSB3-206ENST00000564709 RIOK1Q9BRS2 568 aaKnown RBP25.71■■□□□ 1.71
SPSB3-206ENST00000564709 IKBKBO14920 756 aa25.7■■□□□ 1.71
SPSB3-206ENST00000564709 PTPN14Q15678 1187 aa25.7■■□□□ 1.71
SPSB3-206ENST00000564709 GNL3LQ9NVN8 582 aaKnown RBP25.7■■□□□ 1.71
SPSB3-206ENST00000564709 PCDHA5Q9Y5H7 936 aa25.7■■□□□ 1.71
SPSB3-206ENST00000564709 SPATA31A5Q5VU36 1347 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 SPATA31A7Q8IWB4 1347 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 SEC23AQ15436 765 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 NYAP1Q6ZVC0 841 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 CCDC112Q8NEF3 446 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 ESR2Q92731 530 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 DPF2Q92785 391 aa25.7■■□□□ 1.7
SPSB3-206ENST00000564709 FBXO2Q9UK22 296 aaPredicted RBP25.7■■□□□ 1.7
SPSB3-206ENST00000564709 SCN7AQ01118 1682 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 CCDC196A0A1B0GTZ2 297 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 PTPN21Q16825 1174 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 TMTC2Q8N394 836 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 CELF1Q92879 486 aaKnown RBP25.69■■□□□ 1.7
SPSB3-206ENST00000564709 SHISA4Q96DD7 197 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 FOXP1Q9H334 677 aaPredicted RBP25.69■■□□□ 1.7
SPSB3-206ENST00000564709 PAXBP1Q9Y5B6 917 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 KLRK1P26718 216 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 MYL5Q02045 173 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 ZNF384Q8TF68 577 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 DUOX1Q9NRD9 1551 aa25.69■■□□□ 1.7
SPSB3-206ENST00000564709 FAM205CA6NFA0 338 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 EVX2Q03828 476 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 NAA30Q147X3 362 aaPredicted RBP25.68■■□□□ 1.7
SPSB3-206ENST00000564709 ENAHQ8N8S7 591 aaPredicted RBP25.68■■□□□ 1.7
SPSB3-206ENST00000564709 MINPP1Q9UNW1 487 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 PDE4BQ07343 736 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 NCBP1Q09161 790 aaKnown RBP25.68■■□□□ 1.7
SPSB3-206ENST00000564709 RILPL1Q5EBL4 403 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 CCDC150Q8NCX0 1101 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 CCDC94Q9BW85 323 aaPredicted RBP25.68■■□□□ 1.7
SPSB3-206ENST00000564709 CABP5Q9NP86 173 aa25.68■■□□□ 1.7
SPSB3-206ENST00000564709 PRR29P0C7W0 189 aa25.67■■□□□ 1.7
SPSB3-206ENST00000564709 BMP6P22004 513 aa25.67■■□□□ 1.7
SPSB3-206ENST00000564709 SFPQP23246 707 aaKnown RBP eCLIP25.67■■□□□ 1.7
SPSB3-206ENST00000564709 CAVIN4Q5BKX8 364 aa25.67■■□□□ 1.7
SPSB3-206ENST00000564709 OLFM4Q6UX06 510 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms