RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CTNND1O60716 968 aaKnown RBP20.86■□□□□ 0.93
USB1-209ENST00000564387 PDE4AP27815 886 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 INHBEP58166 350 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 CNKSR2Q8WXI2 1034 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 MS4A4AQ96JQ5 239 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 STRBPQ96SI9 672 aaKnown RBP20.86■□□□□ 0.93
USB1-209ENST00000564387 EHD4Q9H223 541 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 DNAJC18Q9H819 358 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 ATP8A2Q9NTI2 1148 aa20.86■□□□□ 0.93
USB1-209ENST00000564387 MANSC4A6NHS7 340 aaPredicted RBP20.85■□□□□ 0.93
USB1-209ENST00000564387 FOXN1O15353 648 aa20.85■□□□□ 0.93
USB1-209ENST00000564387 PPATQ06203 517 aa20.85■□□□□ 0.93
USB1-209ENST00000564387 ZMYM1Q5SVZ6 1142 aa20.85■□□□□ 0.93
USB1-209ENST00000564387 SCYL3Q8IZE3 742 aa20.85■□□□□ 0.93
USB1-209ENST00000564387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.85■□□□□ 0.93
USB1-209ENST00000564387 SREBF2Q12772 1141 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 PPIL2Q13356 520 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 SDR42E1Q8WUS8 393 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 AIDAQ96BJ3 306 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 SAGE1Q9NXZ1 904 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 SAP30BPQ9UHR5 308 aaKnown RBP20.84■□□□□ 0.93
USB1-209ENST00000564387 TAOK2Q9UL54 1235 aa20.84■□□□□ 0.93
USB1-209ENST00000564387 PRKAB2O43741 272 aa20.83■□□□□ 0.93
USB1-209ENST00000564387 HLA-DOAP06340 250 aa20.83■□□□□ 0.93
USB1-209ENST00000564387 MKRN3Q13064 507 aaKnown RBP20.83■□□□□ 0.93
USB1-209ENST00000564387 RRP1BQ14684 758 aaKnown RBP20.83■□□□□ 0.93
USB1-209ENST00000564387 TTC6Q86TZ1 520 aa20.83■□□□□ 0.93
USB1-209ENST00000564387 NAV1Q8NEY1 1877 aa20.83■□□□□ 0.92
USB1-209ENST00000564387 DOCK1Q14185 1865 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 FAM196BA6NMK8 535 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 CENPBP07199 599 aaPredicted RBP20.82■□□□□ 0.92
USB1-209ENST00000564387 CAP2P40123 477 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 PLCD1P51178 756 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 GABPAQ06546 454 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 GIMAP6Q6P9H5 292 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 OTUD5Q96G74 571 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 BEGAINQ9BUH8 593 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 CFHR5Q9BXR6 569 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 RNF186Q9NXI6 227 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 SERPINB13Q9UIV8 391 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 KCNH4Q9UQ05 1017 aa20.82■□□□□ 0.92
USB1-209ENST00000564387 M0R2C6 588 aa20.81■□□□□ 0.92
USB1-209ENST00000564387 IRF6O14896 467 aa20.81■□□□□ 0.92
USB1-209ENST00000564387 PTPRAP18433 802 aa20.81■□□□□ 0.92
USB1-209ENST00000564387 GTF2A2P52657 109 aa20.81■□□□□ 0.92
USB1-209ENST00000564387 TATDN1Q6P1N9 297 aa20.81■□□□□ 0.92
USB1-209ENST00000564387 GSG1L2A8MUP6 293 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 GPAA1O43292 621 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 HSPA8P11142 646 aaKnown RBP20.8■□□□□ 0.92
USB1-209ENST00000564387 CTCFP49711 727 aaPredicted RBP20.8■□□□□ 0.92
USB1-209ENST00000564387 CENPQQ7L2Z9 268 aaPredicted RBP20.8■□□□□ 0.92
USB1-209ENST00000564387 IFNL1Q8IU54 200 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 SEC62Q99442 399 aaKnown RBP20.8■□□□□ 0.92
USB1-209ENST00000564387 PTPN18Q99952 460 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 GINM1Q9NU53 330 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 MCM9Q9NXL9 1143 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 SLC4A4Q9Y6R1 1079 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 PHIPQ8WWQ0 1821 aa20.8■□□□□ 0.92
USB1-209ENST00000564387 GNAT2P19087 354 aa20.79■□□□□ 0.92
USB1-209ENST00000564387 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
USB1-209ENST00000564387 CRACR2BQ8N4Y2 399 aaPredicted RBP20.79■□□□□ 0.92
USB1-209ENST00000564387 AFG3L2Q9Y4W6 797 aa20.79■□□□□ 0.92
USB1-209ENST00000564387 IGF2BP3O00425 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
USB1-209ENST00000564387 CXCL11O14625 94 aa20.78■□□□□ 0.92
USB1-209ENST00000564387 POLR3DP05423 398 aaPredicted RBP20.78■□□□□ 0.92
USB1-209ENST00000564387 SBK1Q52WX2 424 aa20.78■□□□□ 0.92
USB1-209ENST00000564387 BRI3BPQ8WY22 251 aa20.78■□□□□ 0.92
USB1-209ENST00000564387 PRDM10Q9NQV6 1147 aa20.78■□□□□ 0.92
USB1-209ENST00000564387 PICK1Q9NRD5 415 aa20.78■□□□□ 0.92
USB1-209ENST00000564387 HELLSQ9NRZ9 838 aa20.78■□□□□ 0.92
USB1-209ENST00000564387 BAZ2AQ9UIF9 1905 aaKnown RBP20.78■□□□□ 0.92
USB1-209ENST00000564387 ATAD5Q96QE3 1844 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 PATL2C9JE40 543 aaKnown RBP20.77■□□□□ 0.92
USB1-209ENST00000564387 USP17L12C9JPN9 530 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 USP17L21D6R901 530 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 TRPA1O75762 1119 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 ALDH1A1P00352 501 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 CETPP11597 493 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 SHMT1P34896 483 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 JAG1P78504 1218 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 EVX2Q03828 476 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 SNAPC2Q13487 334 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 MOGSQ13724 837 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 TTC22Q5TAA0 569 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 TBC1D2Q9BYX2 928 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.77■□□□□ 0.92
USB1-209ENST00000564387 ZHX2Q9Y6X8 837 aa20.77■□□□□ 0.92
USB1-209ENST00000564387 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
USB1-209ENST00000564387 ASNSP08243 561 aa20.76■□□□□ 0.91
USB1-209ENST00000564387 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
USB1-209ENST00000564387 NOM1Q5C9Z4 860 aaKnown RBP20.76■□□□□ 0.91
USB1-209ENST00000564387 ERICH6BQ5W0A0 696 aa20.76■□□□□ 0.91
USB1-209ENST00000564387 EPB41L4AQ9HCS5 686 aaPredicted RBP20.76■□□□□ 0.91
USB1-209ENST00000564387 ZCCHC17Q9NP64 241 aaKnown RBP20.76■□□□□ 0.91
USB1-209ENST00000564387 CCL15-CCL14A0A0B4J2E2 113 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 FOXP2O15409 715 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 CYP2D6P10635 497 aa20.75■□□□□ 0.91
USB1-209ENST00000564387 GSPT1P15170 499 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms