RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 USP2O75604 605 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-208ENST00000564247 USP5P45974 858 aa20.2■□□□□ 0.82
CMTM3-208ENST00000564247 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
CMTM3-208ENST00000564247 CDC42EP5Q6NZY7 148 aa20.2■□□□□ 0.82
CMTM3-208ENST00000564247 CSRNP1Q96S65 589 aa20.2■□□□□ 0.82
CMTM3-208ENST00000564247 ATP8A2Q9NTI2 1148 aa20.2■□□□□ 0.82
CMTM3-208ENST00000564247 PRKAB2O43741 272 aa20.19■□□□□ 0.82
CMTM3-208ENST00000564247 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
CMTM3-208ENST00000564247 ALX1Q15699 326 aa20.19■□□□□ 0.82
CMTM3-208ENST00000564247 GIMAP6Q6P9H5 292 aa20.19■□□□□ 0.82
CMTM3-208ENST00000564247 CDAN1Q8IWY9 1227 aa20.19■□□□□ 0.82
CMTM3-208ENST00000564247 IFNL3Q8IZI9 196 aa20.19■□□□□ 0.82
CMTM3-208ENST00000564247 C22orf23Q9BZE7 217 aa20.19■□□□□ 0.82
CMTM3-208ENST00000564247 GSG1L2A8MUP6 293 aa20.18■□□□□ 0.82
CMTM3-208ENST00000564247 TDO2P48775 406 aa20.18■□□□□ 0.82
CMTM3-208ENST00000564247 RNF20Q5VTR2 975 aa20.18■□□□□ 0.82
CMTM3-208ENST00000564247 NAPBQ9H115 298 aa20.18■□□□□ 0.82
CMTM3-208ENST00000564247 SAGE1Q9NXZ1 904 aa20.18■□□□□ 0.82
CMTM3-208ENST00000564247 RBM8AQ9Y5S9 174 aaKnown RBP20.18■□□□□ 0.82
CMTM3-208ENST00000564247 OTOFQ9HC10 1997 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 FGAP02671 866 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 RHBDL3P58872 404 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 AMOTL1Q8IY63 956 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 ANKRD13AQ8IZ07 590 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 TGFBRAP1Q8WUH2 860 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 SDR42E1Q8WUS8 393 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 SLC10A4Q96EP9 437 aa20.17■□□□□ 0.82
CMTM3-208ENST00000564247 LAMB1P07942 1786 aa20.16■□□□□ 0.82
CMTM3-208ENST00000564247 SPRYD7Q5W111 196 aa20.16■□□□□ 0.82
CMTM3-208ENST00000564247 FAM151AQ8WW52 585 aa20.16■□□□□ 0.82
CMTM3-208ENST00000564247 HOOK2Q96ED9 719 aa20.16■□□□□ 0.82
CMTM3-208ENST00000564247 CLMNQ96JQ2 1002 aa20.16■□□□□ 0.82
CMTM3-208ENST00000564247 TSKSQ9UJT2 592 aa20.16■□□□□ 0.82
CMTM3-208ENST00000564247 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
CMTM3-208ENST00000564247 HSPA4P34932 840 aa20.15■□□□□ 0.82
CMTM3-208ENST00000564247 IMMTQ16891 758 aaKnown RBP20.15■□□□□ 0.82
CMTM3-208ENST00000564247 IFFO2Q5TF58 517 aa20.15■□□□□ 0.82
CMTM3-208ENST00000564247 TNS4Q8IZW8 715 aa20.15■□□□□ 0.82
CMTM3-208ENST00000564247 RNF186Q9NXI6 227 aa20.15■□□□□ 0.82
CMTM3-208ENST00000564247 ZMYM6O95789 1325 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 ZNF213O14771 459 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 ZBTB48P10074 688 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-208ENST00000564247 TM4SF4P48230 202 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 NFIAQ12857 509 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 NECTIN1Q15223 517 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 CREB3L3Q68CJ9 461 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 MAPKAPK5Q8IW41 473 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 DCP1AQ9NPI6 582 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-208ENST00000564247 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 FAM198AQ9UFP1 575 aa20.14■□□□□ 0.81
CMTM3-208ENST00000564247 RBM25P49756 843 aaKnown RBP20.13■□□□□ 0.81
CMTM3-208ENST00000564247 MAP3K9P80192 1104 aa20.13■□□□□ 0.81
CMTM3-208ENST00000564247 MKRN3Q13064 507 aaKnown RBP20.13■□□□□ 0.81
CMTM3-208ENST00000564247 PICALMQ13492 652 aa20.13■□□□□ 0.81
CMTM3-208ENST00000564247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.13■□□□□ 0.81
CMTM3-208ENST00000564247 WNK4Q96J92 1243 aa20.13■□□□□ 0.81
CMTM3-208ENST00000564247 IDI2Q9BXS1 227 aa20.13■□□□□ 0.81
CMTM3-208ENST00000564247 EPB41L4AQ9HCS5 686 aaPredicted RBP20.13■□□□□ 0.81
CMTM3-208ENST00000564247 MINDY4BA8MYZ0 360 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 SLC27A2O14975 620 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 FOXP2O15409 715 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
CMTM3-208ENST00000564247 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-208ENST00000564247 TRPA1O75762 1119 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 POLR3DP05423 398 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-208ENST00000564247 SREBF2Q12772 1141 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 TCP10Q12799 353 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-208ENST00000564247 TBC1D32Q96NH3 1257 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
CMTM3-208ENST00000564247 CASP8AP2Q9UKL3 1982 aa20.12■□□□□ 0.81
CMTM3-208ENST00000564247 USP17L12C9JPN9 530 aa20.11■□□□□ 0.81
CMTM3-208ENST00000564247 USP17L21D6R901 530 aa20.11■□□□□ 0.81
CMTM3-208ENST00000564247 ENTPD3O75355 529 aa20.11■□□□□ 0.81
CMTM3-208ENST00000564247 SLC3A2P08195 630 aaKnown RBP20.11■□□□□ 0.81
CMTM3-208ENST00000564247 ANAPC15P60006 121 aa20.11■□□□□ 0.81
CMTM3-208ENST00000564247 SBK1Q52WX2 424 aa20.11■□□□□ 0.81
CMTM3-208ENST00000564247 DCAF15Q66K64 600 aa20.11■□□□□ 0.81
CMTM3-208ENST00000564247 FLT1P17948 1338 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 MANSC4A6NHS7 340 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-208ENST00000564247 INHBEP58166 350 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 KRT32Q14532 448 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 CTR9Q6PD62 1173 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 TTC6Q86TZ1 520 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 ELP3Q9H9T3 547 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
CMTM3-208ENST00000564247 SAP30BPQ9UHR5 308 aaKnown RBP20.1■□□□□ 0.81
CMTM3-208ENST00000564247 CSADQ9Y600 493 aa20.1■□□□□ 0.81
CMTM3-208ENST00000564247 CYP21A2P08686 494 aa20.09■□□□□ 0.81
CMTM3-208ENST00000564247 VGLL4Q14135 290 aa20.09■□□□□ 0.81
CMTM3-208ENST00000564247 ZFPM1Q8IX07 1006 aa20.09■□□□□ 0.81
CMTM3-208ENST00000564247 KCNB2Q92953 911 aa20.09■□□□□ 0.81
CMTM3-208ENST00000564247 ZNF341Q9BYN7 854 aa20.09■□□□□ 0.81
CMTM3-208ENST00000564247 BAZ2AQ9UIF9 1905 aaKnown RBP20.09■□□□□ 0.81
CMTM3-208ENST00000564247 CDK5RAP2Q96SN8 1893 aa20.09■□□□□ 0.81
CMTM3-208ENST00000564247 GJA5P36382 358 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 HAND2P61296 217 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 PPARAQ07869 468 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 TSGA10IPQ3SY00 556 aa20.08■□□□□ 0.81
CMTM3-208ENST00000564247 MIGA2Q7L4E1 593 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms