RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 SREBF2Q12772 1141 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 TCP10Q12799 353 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-203ENST00000564106 OTUD5Q96G74 571 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 FAM227BQ96M60 508 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
UBFD1-203ENST00000564106 DDX4Q9NQI0 724 aaKnown RBP11.62□□□□□ -0.55
UBFD1-203ENST00000564106 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-203ENST00000564106 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
UBFD1-203ENST00000564106 PDS5AQ29RF7 1337 aaKnown RBP11.61□□□□□ -0.55
UBFD1-203ENST00000564106 CDK5RAP2Q96SN8 1893 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 K7ELQ4 463 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-203ENST00000564106 FKTNO75072 461 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 ZAP70P43403 619 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 TNFAIP1Q13829 316 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 ZMYM1Q5SVZ6 1142 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 CD99L2Q8TCZ2 262 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 MAP4K1Q92918 833 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 EDC3Q96F86 508 aaKnown RBP11.61□□□□□ -0.55
UBFD1-203ENST00000564106 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 MRIQ9BWK5 157 aa11.61□□□□□ -0.55
UBFD1-203ENST00000564106 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
UBFD1-203ENST00000564106 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
UBFD1-203ENST00000564106 GAKO14976 1311 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 SALL1Q9NSC2 1324 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 PTPRFP10586 1907 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 SPDYE5A6NIY4 337 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 MAP3K9P80192 1104 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 MLLT1Q03111 559 aaPredicted RBP11.6□□□□□ -0.55
UBFD1-203ENST00000564106 MAP3K12Q12852 859 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 MOGSQ13724 837 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 KRT32Q14532 448 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 NOM1Q5C9Z4 860 aaKnown RBP11.6□□□□□ -0.55
UBFD1-203ENST00000564106 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 FAM83AQ86UY5 434 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 WDR66Q8TBY9 1149 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 APPBP2Q92624 585 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 DSCC1Q9BVC3 393 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 ARHGAP39Q9C0H5 1083 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 IL25Q9H293 177 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 DENND2AQ9ULE3 1009 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 SUGT1Q9Y2Z0 365 aa11.6□□□□□ -0.55
UBFD1-203ENST00000564106 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 CCL15-CCL14A0A0B4J2E2 113 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 IRF6O14896 467 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 WDHD1O75717 1129 aaPredicted RBP11.59□□□□□ -0.55
UBFD1-203ENST00000564106 LDHBP07195 334 aaKnown RBP11.59□□□□□ -0.55
UBFD1-203ENST00000564106 HSP90AA1P07900 732 aaKnown RBP11.59□□□□□ -0.55
UBFD1-203ENST00000564106 PSMA5P28066 241 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 CTGFP29279 349 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 CCL15Q16663 113 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 CCDC84Q86UT8 332 aaPredicted RBP11.59□□□□□ -0.55
UBFD1-203ENST00000564106 TM6SF1Q9BZW5 370 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 USP40Q9NVE5 1235 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 RBM8AQ9Y5S9 174 aaKnown RBP11.59□□□□□ -0.55
UBFD1-203ENST00000564106 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 MAST3O60307 1309 aa11.59□□□□□ -0.55
UBFD1-203ENST00000564106 DDTLA6NHG4 134 aaPredicted RBP11.58□□□□□ -0.56
UBFD1-203ENST00000564106 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 BTBD19C9JJ37 291 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 ECM2O94769 699 aaPredicted RBP11.58□□□□□ -0.56
UBFD1-203ENST00000564106 CYP2E1P05181 493 aaPredicted RBP11.58□□□□□ -0.56
UBFD1-203ENST00000564106 ADD2P35612 726 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 TNNI2P48788 182 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 RHBDL3P58872 404 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 NECTIN1Q15223 517 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 FKBP1CQ5VVH2 108 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 FAM151AQ8WW52 585 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 KCNB2Q92953 911 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 CTNNA3Q9UI47 895 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 ZNF112Q9UJU3 913 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 TRIM17Q9Y577 477 aa11.58□□□□□ -0.56
UBFD1-203ENST00000564106 DOCK1Q14185 1865 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 RBBP6Q7Z6E9 1792 aaKnown RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 UNCXA6NJT0 531 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 PHF20L1A8MW92 1017 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 NEK4P51957 841 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 MECOMQ03112 1051 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 RRP1BQ14684 758 aaKnown RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 FBXO46Q6PJ61 603 aaPredicted RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 ZGPATQ8N5A5 531 aaKnown RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 KIAA0100Q14667 2235 aaKnown RBP11.57□□□□□ -0.56
UBFD1-203ENST00000564106 ADGRA2Q96PE1 1338 aa11.57□□□□□ -0.56
UBFD1-203ENST00000564106 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 BTDP43251 543 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 INHBEP58166 350 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 PTH1RQ03431 593 aa11.56□□□□□ -0.56
UBFD1-203ENST00000564106 SHROOM1Q2M3G4 852 aaPredicted RBP11.56□□□□□ -0.56
UBFD1-203ENST00000564106 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms