RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 ELP3Q9H9T3 547 aa22.71■■□□□ 1.23
SYNGR3-203ENST00000563869 GTF3C3Q9Y5Q9 886 aa22.71■■□□□ 1.23
SYNGR3-203ENST00000563869 NDUFB9Q9Y6M9 179 aa22.71■■□□□ 1.23
SYNGR3-203ENST00000563869 MAGEB6P1A0A0J9YX57 407 aa22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 GRIK5Q16478 980 aa22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 APOBEC3HQ6NTF7 200 aaKnown RBP22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 HELLSQ9NRZ9 838 aa22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 TAOK2Q9UL54 1235 aa22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
SYNGR3-203ENST00000563869 RPAP1Q9BWH6 1393 aaPredicted RBP22.69■■□□□ 1.22
SYNGR3-203ENST00000563869 RGS3P49796 1198 aa22.69■■□□□ 1.22
SYNGR3-203ENST00000563869 TMEM106CQ9BVX2 250 aa22.69■■□□□ 1.22
SYNGR3-203ENST00000563869 DIAPH3Q9NSV4 1193 aa22.69■■□□□ 1.22
SYNGR3-203ENST00000563869 ARHGEF6Q15052 776 aa22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 EDC3Q96F86 508 aaKnown RBP22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 ZNF333Q96JL9 665 aa22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 TEPSINQ96N21 525 aa22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 IDI2Q9BXS1 227 aa22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 CRNKL1Q9BZJ0 848 aaKnown RBP22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 TDRD3Q9H7E2 651 aaKnown RBP22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 USP40Q9NVE5 1235 aa22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 CDK5RAP2Q96SN8 1893 aa22.68■■□□□ 1.22
SYNGR3-203ENST00000563869 TCRBV5S4A2TA0A5A2 114 aa22.67■■□□□ 1.22
SYNGR3-203ENST00000563869 ENTPD3O75355 529 aa22.67■■□□□ 1.22
SYNGR3-203ENST00000563869 BRI3BPQ8WY22 251 aa22.67■■□□□ 1.22
SYNGR3-203ENST00000563869 ZFYVE28Q9HCC9 887 aa22.67■■□□□ 1.22
SYNGR3-203ENST00000563869 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 BRCA2P51587 3418 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 RAD50Q92878 1312 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 SDSP20132 328 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 GTF2A2P52657 109 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 TAF1CQ15572 869 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 CDC42EP5Q6NZY7 148 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 NBPF11Q86T75 865 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 AMOTL1Q8IY63 956 aa22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
SYNGR3-203ENST00000563869 CCL15-CCL14A0A0B4J2E2 113 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 MAP3K9P80192 1104 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 CCL15Q16663 113 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 ZMYM1Q5SVZ6 1142 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 CDAN1Q8IWY9 1227 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 TEX11Q8IYF3 940 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 ZNF384Q8TF68 577 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 CNKSR2Q8WXI2 1034 aa22.65■■□□□ 1.22
SYNGR3-203ENST00000563869 GSPT1P15170 499 aaKnown RBP22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 VGLL4Q14135 290 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 SLC9C1Q4G0N8 1177 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 MCMDC2Q4G0Z9 681 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 GIMAP6Q6P9H5 292 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 DHX36Q9H2U1 1008 aaKnown RBP22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 ATP8A2Q9NTI2 1148 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 PTCH2Q9Y6C5 1203 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 MYH1P12882 1939 aa22.64■■□□□ 1.21
SYNGR3-203ENST00000563869 TCP10L2B9ZVM9 353 aa22.63■■□□□ 1.21
SYNGR3-203ENST00000563869 FAM151AQ8WW52 585 aa22.63■■□□□ 1.21
SYNGR3-203ENST00000563869 NACAP1Q9BZK3 213 aa22.63■■□□□ 1.21
SYNGR3-203ENST00000563869 TMEM39BQ9GZU3 492 aa22.63■■□□□ 1.21
SYNGR3-203ENST00000563869 CSADQ9Y600 493 aa22.63■■□□□ 1.21
SYNGR3-203ENST00000563869 USP5P45974 858 aa22.62■■□□□ 1.21
SYNGR3-203ENST00000563869 FXR1P51114 621 aaKnown RBP eCLIP22.62■■□□□ 1.21
SYNGR3-203ENST00000563869 FAM43AQ8N2R8 423 aa22.62■■□□□ 1.21
SYNGR3-203ENST00000563869 RIOK1Q9BRS2 568 aaKnown RBP22.62■■□□□ 1.21
SYNGR3-203ENST00000563869 NAV1Q8NEY1 1877 aa22.62■■□□□ 1.21
SYNGR3-203ENST00000563869 RHBDL3P58872 404 aa22.61■■□□□ 1.21
SYNGR3-203ENST00000563869 MIGA1Q8NAN2 632 aa22.61■■□□□ 1.21
SYNGR3-203ENST00000563869 OTUD5Q96G74 571 aa22.61■■□□□ 1.21
SYNGR3-203ENST00000563869 ZSWIM8A7E2V4 1837 aa22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 SPDYE5A6NIY4 337 aa22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 WDHD1O75717 1129 aaPredicted RBP22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 MBD4O95243 580 aa22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 SLC4A8Q2Y0W8 1093 aa22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 ADGRA1Q86SQ6 560 aa22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 ZCCHC17Q9NP64 241 aaKnown RBP22.6■■□□□ 1.21
SYNGR3-203ENST00000563869 CDC45O75419 566 aa22.59■■□□□ 1.21
SYNGR3-203ENST00000563869 HLA-DOAP06340 250 aa22.59■■□□□ 1.21
SYNGR3-203ENST00000563869 SH3RF3Q8TEJ3 882 aaPredicted RBP22.59■■□□□ 1.21
SYNGR3-203ENST00000563869 ATRNL1Q5VV63 1379 aa22.59■■□□□ 1.21
SYNGR3-203ENST00000563869 GPAA1O43292 621 aa22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 TLR2O60603 784 aa22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 DCAF15Q66K64 600 aa22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 TTC6Q86TZ1 520 aa22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 OSBP2Q969R2 916 aa22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 STRBPQ96SI9 672 aaKnown RBP22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 PUS7LQ9H0K6 701 aaKnown RBP22.58■■□□□ 1.21
SYNGR3-203ENST00000563869 CETPP11597 493 aa22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 KIF22Q14807 665 aa22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 ERO1BQ86YB8 467 aa22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 OSBPL5Q9H0X9 879 aaPredicted RBP22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 COLQQ9Y215 455 aaPredicted RBP22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 SNCAIPQ9Y6H5 919 aa22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 SLC4A4Q9Y6R1 1079 aa22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 CCDC171Q6TFL3 1326 aa22.57■■□□□ 1.2
SYNGR3-203ENST00000563869 PATL2C9JE40 543 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-203ENST00000563869 GNRH1P01148 92 aa22.56■■□□□ 1.2
SYNGR3-203ENST00000563869 CHMLP26374 656 aa22.56■■□□□ 1.2
SYNGR3-203ENST00000563869 LACTBP83111 547 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-203ENST00000563869 NMIQ13287 307 aaPredicted RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms