RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 SPACA3Q8IXA5 215 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 STK11IPQ8N1F8 1099 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 MISP3Q96FF7 219 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 EMILIN2Q9BXX0 1053 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 C12orf49Q9H741 205 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 CBX8Q9HC52 389 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 CNTNAP4Q9C0A0 1308 aa5.18□□□□□ -1.58
LINC01416-201ENST00000563553 EOMESO95936 686 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 JUNBP17275 347 aaPredicted RBP5.17□□□□□ -1.58
LINC01416-201ENST00000563553 CDK8P49336 464 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 IFI16Q16666 785 aaKnown RBP5.17□□□□□ -1.58
LINC01416-201ENST00000563553 PCNX4Q63HM2 1172 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 FBRSQ9HAH7 460 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 USP17L7P0C7H9 530 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 NKPD1Q17RQ9 610 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 ALG1LQ6GMV1 187 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 LLGL2Q6P1M3 1020 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 ACSBG1Q96GR2 724 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 VAV3Q9UKW4 847 aa5.17□□□□□ -1.58
LINC01416-201ENST00000563553 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
LINC01416-201ENST00000563553 LRFN4Q6PJG9 635 aa5.16□□□□□ -1.58
LINC01416-201ENST00000563553 ERICH6Q7L0X2 663 aa5.16□□□□□ -1.58
LINC01416-201ENST00000563553 POU5F2Q8N7G0 328 aa5.16□□□□□ -1.58
LINC01416-201ENST00000563553 ITIH2P19823 946 aa5.15□□□□□ -1.58
LINC01416-201ENST00000563553 KCNA1Q09470 495 aa5.15□□□□□ -1.58
LINC01416-201ENST00000563553 LRRN4CLQ8ND94 238 aa5.15□□□□□ -1.58
LINC01416-201ENST00000563553 CEP44Q9C0F1 390 aa5.15□□□□□ -1.58
LINC01416-201ENST00000563553 PRDM10Q9NQV6 1147 aa5.15□□□□□ -1.58
LINC01416-201ENST00000563553 FANCGO15287 622 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 YBX3P16989 372 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC01416-201ENST00000563553 NKG7Q16617 165 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 AOC3Q16853 763 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 CYFIP1Q7L576 1253 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 ZSCAN29Q8IWY8 852 aaPredicted RBP5.15□□□□□ -1.59
LINC01416-201ENST00000563553 PRDM7Q9NQW5 492 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 FAM8A1Q9UBU6 413 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 PCDHA4Q9UN74 947 aa5.15□□□□□ -1.59
LINC01416-201ENST00000563553 SLITRK5O94991 958 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 SLBPQ14493 270 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC01416-201ENST00000563553 ARMCX6Q7L4S7 300 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 ASIC4Q96FT7 647 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 PLPPR2Q96GM1 343 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 PRR33A8MZF0 331 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 IGF2BP3O00425 579 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC01416-201ENST00000563553 GIPC1O14908 333 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 JAG1P78504 1218 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 DIEXFQ68CQ4 756 aaKnown RBP5.14□□□□□ -1.59
LINC01416-201ENST00000563553 SCARA3Q6AZY7 606 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 HRASLS5Q96KN8 279 aa5.14□□□□□ -1.59
LINC01416-201ENST00000563553 C8AP07357 584 aa5.13□□□□□ -1.59
LINC01416-201ENST00000563553 RC3H2Q9HBD1 1191 aaKnown RBP5.13□□□□□ -1.59
LINC01416-201ENST00000563553 SSU72Q9NP77 194 aaKnown RBP5.13□□□□□ -1.59
LINC01416-201ENST00000563553 CYP8B1Q9UNU6 501 aa5.13□□□□□ -1.59
LINC01416-201ENST00000563553 TMEM265A0A087WTH1 108 aa5.13□□□□□ -1.59
LINC01416-201ENST00000563553 LDHBP07195 334 aaKnown RBP5.13□□□□□ -1.59
LINC01416-201ENST00000563553 ATG4DQ86TL0 474 aaPredicted RBP5.13□□□□□ -1.59
LINC01416-201ENST00000563553 PITPNM2Q9BZ72 1349 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 LOC105371045A0A1W2PR82 267 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 HNRNPUQ00839 825 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC01416-201ENST00000563553 SPG7Q9UQ90 795 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 GNA15P30679 374 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 LRRC14Q15048 493 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 RIN3Q8TB24 985 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 TRAIPQ9BWF2 469 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 PCDHB5Q9Y5E4 795 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 SNX11Q9Y5W9 270 aa5.12□□□□□ -1.59
LINC01416-201ENST00000563553 PRAMEF27A3QJZ7 478 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 GFRA2O00451 464 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 CAP2P40123 477 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 SV2BQ7L1I2 683 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 SEMA3GQ9NS98 782 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 SAMM50Q9Y512 469 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 LRIG2O94898 1065 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 WIPI1Q5MNZ9 446 aaPredicted RBP5.11□□□□□ -1.59
LINC01416-201ENST00000563553 TTBK2Q6IQ55 1244 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 SLC23A3Q6PIS1 610 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 ANP32EQ9BTT0 268 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 C19orf73Q9NVV2 129 aa5.11□□□□□ -1.59
LINC01416-201ENST00000563553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.11□□□□□ -1.59
LINC01416-201ENST00000563553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.1□□□□□ -1.59
LINC01416-201ENST00000563553 ATP2B2Q01814 1243 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 SEPT6Q14141 434 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 ZNF648Q5T619 568 aaPredicted RBP5.1□□□□□ -1.59
LINC01416-201ENST00000563553 ANGEL2Q5VTE6 544 aaKnown RBP5.1□□□□□ -1.59
LINC01416-201ENST00000563553 FLAD1Q8NFF5 587 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 ELMO3Q96BJ8 720 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 WNT10AQ9GZT5 417 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 BCL11AQ9H165 835 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 GTF2IRD1Q9UHL9 959 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 MAPK8IP1Q9UQF2 711 aa5.1□□□□□ -1.59
LINC01416-201ENST00000563553 PRPF40AO75400 957 aaKnown RBP5.09□□□□□ -1.59
LINC01416-201ENST00000563553 ZNF865P0CJ78 1059 aaPredicted RBP5.09□□□□□ -1.59
LINC01416-201ENST00000563553 MEI1Q5TIA1 1274 aa5.09□□□□□ -1.59
LINC01416-201ENST00000563553 C22orf34Q6ZV56 151 aa5.09□□□□□ -1.59
LINC01416-201ENST00000563553 PI4K2BQ8TCG2 481 aa5.09□□□□□ -1.59
LINC01416-201ENST00000563553 FAM168AQ92567 244 aa5.09□□□□□ -1.59
LINC01416-201ENST00000563553 TTF2Q9UNY4 1162 aaKnown RBP5.09□□□□□ -1.59
LINC01416-201ENST00000563553 ST14Q9Y5Y6 855 aa5.09□□□□□ -1.59
LINC01416-201ENST00000563553 WRNQ14191 1432 aaPredicted RBP eCLIP5.09□□□□□ -1.59
LINC01416-201ENST00000563553 FZD5Q13467 585 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms