RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 RNPC3Q96LT9 517 aaKnown RBP12.6□□□□□ -0.39
SNX29-202ENST00000563308 CIAO1O76071 339 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 IFIT1P09914 478 aaKnown RBP12.59□□□□□ -0.39
SNX29-202ENST00000563308 BMP1P13497 986 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 SMCR8Q8TEV9 937 aaPredicted RBP12.59□□□□□ -0.39
SNX29-202ENST00000563308 LPIN2Q92539 896 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 SIL1Q9H173 461 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
SNX29-202ENST00000563308 CXXC1Q9P0U4 656 aaPredicted RBP12.59□□□□□ -0.39
SNX29-202ENST00000563308 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 PA2G4Q9UQ80 394 aaKnown RBP12.59□□□□□ -0.39
SNX29-202ENST00000563308 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
SNX29-202ENST00000563308 CYP2C8P10632 490 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 COL6A1P12109 1028 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 DNAJB2P25686 324 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
SNX29-202ENST00000563308 ZKSCAN4Q969J2 545 aaPredicted RBP12.58□□□□□ -0.4
SNX29-202ENST00000563308 ZDHHC15Q96MV8 337 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 SENP6Q9GZR1 1112 aaPredicted RBP12.58□□□□□ -0.4
SNX29-202ENST00000563308 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 KCNH6Q9H252 994 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 COPRSQ9NQ92 184 aa12.58□□□□□ -0.4
SNX29-202ENST00000563308 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.57□□□□□ -0.4
SNX29-202ENST00000563308 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.57□□□□□ -0.4
SNX29-202ENST00000563308 PRR33A8MZF0 331 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 FRAT2O75474 233 aaPredicted RBP12.57□□□□□ -0.4
SNX29-202ENST00000563308 BCAR3O75815 825 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 SLC5A1P13866 664 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 TRIM27P14373 513 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 CACNB3P54284 484 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
SNX29-202ENST00000563308 TEKT1Q969V4 418 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 TIFAQ96CG3 184 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
SNX29-202ENST00000563308 IL15P40933 162 aaPredicted RBP12.56□□□□□ -0.4
SNX29-202ENST00000563308 MTX1Q13505 466 aa12.56□□□□□ -0.4
SNX29-202ENST00000563308 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
SNX29-202ENST00000563308 DCAF15Q66K64 600 aa12.56□□□□□ -0.4
SNX29-202ENST00000563308 HHIPL2Q6UWX4 724 aa12.56□□□□□ -0.4
SNX29-202ENST00000563308 MIER1Q8N108 512 aa12.56□□□□□ -0.4
SNX29-202ENST00000563308 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
SNX29-202ENST00000563308 ZBTB22O15209 634 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 ADORA1P30542 326 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 PHKA1P46020 1223 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
SNX29-202ENST00000563308 FKBP1CQ5VVH2 108 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 BADQ92934 168 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 PRDM12Q9H4Q4 367 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 ATP11BQ9Y2G3 1177 aa12.55□□□□□ -0.4
SNX29-202ENST00000563308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.55□□□□□ -0.4
SNX29-202ENST00000563308 GNAI3P08754 354 aa12.54□□□□□ -0.4
SNX29-202ENST00000563308 PRDX5P30044 214 aa12.54□□□□□ -0.4
SNX29-202ENST00000563308 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
SNX29-202ENST00000563308 CCDC129Q6ZRS4 1044 aa12.54□□□□□ -0.4
SNX29-202ENST00000563308 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
SNX29-202ENST00000563308 FAM83AQ86UY5 434 aa12.54□□□□□ -0.4
SNX29-202ENST00000563308 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
SNX29-202ENST00000563308 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
SNX29-202ENST00000563308 TIMM10P62072 90 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 DIXDC1Q155Q3 683 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 MICALL1Q8N3F8 863 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 DAGLAQ9Y4D2 1042 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 MAST3O60307 1309 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
SNX29-202ENST00000563308 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
SNX29-202ENST00000563308 KCNQ1P51787 676 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 RTP1P59025 263 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 TFCP2Q12800 502 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 CCDC102BQ68D86 513 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 CDC42EP5Q6NZY7 148 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 FBXL18Q96ME1 805 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
SNX29-202ENST00000563308 GNL3LQ9NVN8 582 aaKnown RBP12.52□□□□□ -0.41
SNX29-202ENST00000563308 CDH23Q9H251 3354 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 PNMA6EA0A0J9YXQ4 647 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 SEMA3EO15041 775 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 TFF2Q03403 129 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 NFIAQ12857 509 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 TRIM32Q13049 653 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 RASGRF1Q13972 1273 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 GADL1Q6ZQY3 521 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
SNX29-202ENST00000563308 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
SNX29-202ENST00000563308 RPAP1Q9BWH6 1393 aaPredicted RBP12.51□□□□□ -0.41
SNX29-202ENST00000563308 A0A1B0GUL7 405 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 CXCL11O14625 94 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 GNAI2P04899 355 aa12.5□□□□□ -0.41
SNX29-202ENST00000563308 LDHBP07195 334 aaKnown RBP12.5□□□□□ -0.41
SNX29-202ENST00000563308 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNX29-202ENST00000563308 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
SNX29-202ENST00000563308 TRMT44Q8IYL2 757 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms