RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MBD4O95243 580 aa15.03■□□□□ -0
USB1-207ENST00000563149 ATP1A3P13637 1013 aa15.03■□□□□ -0
USB1-207ENST00000563149 KMT5BQ4FZB7 885 aa15.03■□□□□ -0
USB1-207ENST00000563149 ISM2Q6H9L7 571 aa15.03■□□□□ -0
USB1-207ENST00000563149 MAGEB6Q8N7X4 407 aa15.03■□□□□ -0
USB1-207ENST00000563149 SLAIN2Q9P270 581 aa15.03■□□□□ -0
USB1-207ENST00000563149 ARHGAP6O43182 974 aa15.02□□□□□ -0.01
USB1-207ENST00000563149 FAM193AP78312 1265 aa15.02□□□□□ -0.01
USB1-207ENST00000563149 WTAPQ15007 396 aa15.02□□□□□ -0.01
USB1-207ENST00000563149 RTN1Q16799 776 aa15.02□□□□□ -0.01
USB1-207ENST00000563149 DZIP3Q86Y13 1208 aaKnown RBP15.02□□□□□ -0.01
USB1-207ENST00000563149 FOXP4Q8IVH2 680 aaPredicted RBP15.02□□□□□ -0.01
USB1-207ENST00000563149 KRT222Q8N1A0 295 aa15.02□□□□□ -0.01
USB1-207ENST00000563149 ENOX1Q8TC92 643 aaKnown RBP15.02□□□□□ -0.01
USB1-207ENST00000563149 DPF2Q92785 391 aa15.02□□□□□ -0.01
USB1-207ENST00000563149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.02□□□□□ -0.01
USB1-207ENST00000563149 SARSP49591 514 aaKnown RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 POSTNQ15063 836 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 ELF2Q15723 593 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 HOMER1Q86YM7 354 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 DIS3L2Q8IYB7 885 aaKnown RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 CCDC34Q96HJ3 373 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 FBXO2Q9UK22 296 aaPredicted RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 ZBTB1Q9Y2K1 713 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 SRPRBQ9Y5M8 271 aaKnown RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 BCORQ6W2J9 1755 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 BTBD18B2RXH4 712 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 TOB1P50616 345 aaPredicted RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 TBX2Q13207 712 aaPredicted RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 CRACR2BQ8N4Y2 399 aaPredicted RBP15.01□□□□□ -0.01
USB1-207ENST00000563149 ARMT1Q9H993 441 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 FANCLQ9NW38 375 aa15.01□□□□□ -0.01
USB1-207ENST00000563149 TPM1P09493 284 aa15□□□□□ -0.01
USB1-207ENST00000563149 H2AFXP16104 143 aaPredicted RBP15□□□□□ -0.01
USB1-207ENST00000563149 RASGRF1Q13972 1273 aa15□□□□□ -0.01
USB1-207ENST00000563149 FBXO38Q6PIJ6 1188 aa15□□□□□ -0.01
USB1-207ENST00000563149 REXO1L1PQ8IX06 675 aa15□□□□□ -0.01
USB1-207ENST00000563149 SMARCE1Q969G3 411 aa15□□□□□ -0.01
USB1-207ENST00000563149 SLC4A9Q96Q91 983 aa15□□□□□ -0.01
USB1-207ENST00000563149 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
USB1-207ENST00000563149 MYL10Q9BUA6 226 aa15□□□□□ -0.01
USB1-207ENST00000563149 MAN1B1Q9UKM7 699 aa15□□□□□ -0.01
USB1-207ENST00000563149 RTL9Q8NET4 1388 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 STX10O60499 249 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 TDO2P48775 406 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 MORC3Q14149 939 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 BMS1Q14692 1282 aaKnown RBP14.99□□□□□ -0.01
USB1-207ENST00000563149 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 TACC3Q9Y6A5 838 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 SLC4A4Q9Y6R1 1079 aa14.99□□□□□ -0.01
USB1-207ENST00000563149 ZNF18P17022 549 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 XBP1P17861 261 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 BMP6P22004 513 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 ERCC5P28715 1186 aaPredicted RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 CREBRFQ8IUR6 639 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 UTP14AQ9BVJ6 771 aaKnown RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 INCENPQ9NQS7 918 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 ANAPC4Q9UJX5 808 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 BMP15O95972 392 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 GUCY1A2P33402 732 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 PDE4BQ07343 736 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 PARP10Q53GL7 1025 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 TMEM139Q8IV31 216 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 FANCBQ8NB91 859 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 HELBQ8NG08 1087 aaPredicted RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 SPATA20Q8TB22 786 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.98□□□□□ -0.01
USB1-207ENST00000563149 SERTAD1Q9UHV2 236 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 DNAI1Q9UI46 699 aa14.98□□□□□ -0.01
USB1-207ENST00000563149 V9GYY5 206 aaPredicted RBP14.98□□□□□ -0.01
USB1-207ENST00000563149 POLR2DO15514 142 aaKnown RBP14.97□□□□□ -0.01
USB1-207ENST00000563149 CDK11BP21127 795 aaKnown RBP14.97□□□□□ -0.01
USB1-207ENST00000563149 CCDC152Q4G0S7 254 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 SPECC1LQ69YQ0 1117 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 LCORLQ8N3X6 602 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 BAG1Q99933 345 aaPredicted RBP14.97□□□□□ -0.01
USB1-207ENST00000563149 ARGLU1Q9NWB6 273 aaPredicted RBP14.97□□□□□ -0.01
USB1-207ENST00000563149 AATFQ9NY61 560 aaKnown RBP eCLIP14.97□□□□□ -0.01
USB1-207ENST00000563149 KCNJ14Q9UNX9 436 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 NHSL1Q5SYE7 1610 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
USB1-207ENST00000563149 TMEM232C9JQI7 657 aa14.96□□□□□ -0.01
USB1-207ENST00000563149 ACTN4O43707 911 aaKnown RBP14.96□□□□□ -0.01
USB1-207ENST00000563149 IGHMBP2P38935 993 aaKnown RBP14.96□□□□□ -0.01
USB1-207ENST00000563149 PPARAQ07869 468 aa14.96□□□□□ -0.01
USB1-207ENST00000563149 ERCC6LQ2NKX8 1250 aa14.96□□□□□ -0.01
USB1-207ENST00000563149 RRP12Q5JTH9 1297 aaKnown RBP14.96□□□□□ -0.01
USB1-207ENST00000563149 INTS13Q9NVM9 706 aa14.96□□□□□ -0.01
USB1-207ENST00000563149 PPP2R2CQ9Y2T4 447 aa14.96□□□□□ -0.01
USB1-207ENST00000563149 NFE2L3Q9Y4A8 694 aa14.96□□□□□ -0.01
USB1-207ENST00000563149 EFCAB8A8MWE9 144 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 FOXN1O15353 648 aa14.96□□□□□ -0.02
USB1-207ENST00000563149 ATP8B1O43520 1251 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms