RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 TTLL3Q9Y4R7 772 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 DLGAP5Q15398 846 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
RPAP1-204ENST00000562303 ERCC6LQ2NKX8 1250 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 FAM47CQ5HY64 1035 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 CCDC24Q8N4L8 307 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 IP6K1Q92551 441 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 EPSTI1Q96J88 318 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 UIMC1Q96RL1 719 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 DNM3Q9UQ16 869 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
RPAP1-204ENST00000562303 TAF5LO75529 589 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 SNX29Q8TEQ0 813 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 BAG1Q99933 345 aaPredicted RBP12.54□□□□□ -0.4
RPAP1-204ENST00000562303 CARD10Q9BWT7 1032 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 TSPYL6Q8N831 410 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 H7C1D1 291 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 ACTN4O43707 911 aaKnown RBP12.53□□□□□ -0.4
RPAP1-204ENST00000562303 CHMLP26374 656 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 RNASE9P60153 205 aaKnown RBP12.53□□□□□ -0.4
RPAP1-204ENST00000562303 TNNI3KQ59H18 835 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 CSGALNACT2Q8N6G5 542 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 FPGT-TNNI3KV9GXZ4 949 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 EBAG9O00559 213 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 EXOC3O60645 756 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 APBA3O96018 575 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
RPAP1-204ENST00000562303 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPAP1-204ENST00000562303 GPR162Q16538 588 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 ATL3Q6DD88 541 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 MICALL1Q8N3F8 863 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 CACYBPQ9HB71 228 aaKnown RBP12.53□□□□□ -0.4
RPAP1-204ENST00000562303 LRWD1Q9UFC0 647 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 KIF22Q14807 665 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 CEP57Q86XR8 500 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 STMN2Q93045 179 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
RPAP1-204ENST00000562303 TBC1D7Q9P0N9 293 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 CTTNBP2NLQ9P2B4 639 aa12.53□□□□□ -0.4
RPAP1-204ENST00000562303 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.4
RPAP1-204ENST00000562303 SATB1Q01826 763 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 TTC38Q5R3I4 469 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.4
RPAP1-204ENST00000562303 NBPF11Q86T75 865 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 MAPKAPK5Q8IW41 473 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 IGSF22Q8N9C0 903 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 CSADQ9Y600 493 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 PPIP5K2O43314 1243 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 HERC4Q5GLZ8 1057 aaPredicted RBP12.52□□□□□ -0.4
RPAP1-204ENST00000562303 KRT25Q7Z3Z0 450 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 GLG1Q92896 1179 aa12.52□□□□□ -0.4
RPAP1-204ENST00000562303 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.4
RPAP1-204ENST00000562303 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 UTP11Q9Y3A2 253 aaKnown RBP12.52□□□□□ -0.41
RPAP1-204ENST00000562303 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 GCNT3O95395 438 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 RPS6KB1P23443 525 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 TRIM14Q14142 442 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 PPFIBP2Q8ND30 876 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 CASC4Q6P4E1 433 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 FAM76AQ8TAV0 307 aa12.52□□□□□ -0.41
RPAP1-204ENST00000562303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.52□□□□□ -0.41
RPAP1-204ENST00000562303 VAMP4O75379 141 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 SNX21Q969T3 373 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 NPATQ14207 1427 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 GPAA1O43292 621 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 FAM160A1Q05DH4 1040 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 TGFBRAP1Q8WUH2 860 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 APPBP2Q92624 585 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
RPAP1-204ENST00000562303 BAG6P46379 1132 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
RPAP1-204ENST00000562303 CALCRLQ16602 461 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 ANO1Q5XXA6 986 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 MRPL44Q9H9J2 332 aaKnown RBP12.51□□□□□ -0.41
RPAP1-204ENST00000562303 P4HA1P13674 534 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 CPA1P15085 419 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 ANGEL1Q9UNK9 670 aaKnown RBP12.51□□□□□ -0.41
RPAP1-204ENST00000562303 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
RPAP1-204ENST00000562303 NLRX1Q86UT6 975 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 METTL13Q8N6R0 699 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
RPAP1-204ENST00000562303 ASIC3Q9UHC3 531 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms