RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 NUTM2GQ5VZR2 741 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
UBR1-203ENST00000562173 TMEM102Q8N9M5 508 aaPredicted RBP8.19□□□□□ -1.1
UBR1-203ENST00000562173 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 TRAK1Q9UPV9 953 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 RGPD5Q99666 1765 aa8.19□□□□□ -1.1
UBR1-203ENST00000562173 J3QW42 95 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 GNB5O14775 395 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 GIPC1O14908 333 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 PROCP04070 461 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 HFE2Q6ZVN8 426 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 SPOCK3Q9BQ16 436 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 HIRIP3Q9BW71 556 aaPredicted RBP8.18□□□□□ -1.1
UBR1-203ENST00000562173 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 BCL11AQ9H165 835 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 RASSF4Q9H2L5 321 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 NLRP2Q9NX02 1062 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 ROCK1Q13464 1354 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 NRXN1Q9ULB1 1477 aa8.18□□□□□ -1.1
UBR1-203ENST00000562173 A0A1W2PP55 124 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 PTPRAP18433 802 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 ATP11AP98196 1134 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 OSMRQ99650 979 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 MUC3BQ9H195 1237 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 SRA1Q9HD15 236 aaKnown RBP8.17□□□□□ -1.1
UBR1-203ENST00000562173 NOP53Q9NZM5 478 aaKnown RBP8.17□□□□□ -1.1
UBR1-203ENST00000562173 USP35Q9P2H5 1018 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 ADGRB2O60241 1585 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 PEAK1Q9H792 1746 aa8.17□□□□□ -1.1
UBR1-203ENST00000562173 CCDC144AA2RUR9 1427 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 DISP2A7MBM2 1401 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 NFKBIEO00221 500 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 PDE2AO00408 941 aaPredicted RBP8.16□□□□□ -1.1
UBR1-203ENST00000562173 APBA3O96018 575 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 POLR3DP05423 398 aaPredicted RBP8.16□□□□□ -1.1
UBR1-203ENST00000562173 NID1P14543 1247 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 AFF1P51825 1210 aaKnown RBP8.16□□□□□ -1.1
UBR1-203ENST00000562173 GRIK5Q16478 980 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 SPATA31A5Q5VU36 1347 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 CCNJLQ8IV13 435 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 SPATA31A7Q8IWB4 1347 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 DCAF11Q8TEB1 546 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 LATS2Q9NRM7 1088 aa8.16□□□□□ -1.1
UBR1-203ENST00000562173 RRBP1Q9P2E9 1410 aaKnown RBP8.16□□□□□ -1.1
UBR1-203ENST00000562173 WNK3Q9BYP7 1800 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 YTHDC2Q9H6S0 1430 aaKnown RBP8.15□□□□□ -1.1
UBR1-203ENST00000562173 LRPPRCP42704 1394 aaKnown RBP8.15□□□□□ -1.1
UBR1-203ENST00000562173 MSTNO14793 375 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 GNA15P30679 374 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 PTPN12Q05209 780 aaKnown RBP8.15□□□□□ -1.1
UBR1-203ENST00000562173 CEP135Q66GS9 1140 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 ALYREFQ86V81 257 aaKnown RBP8.15□□□□□ -1.1
UBR1-203ENST00000562173 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 NUDT8Q8WV74 236 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 BCL2L13Q9BXK5 485 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 ADAM19Q9H013 955 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 LIN7BQ9HAP6 207 aa8.15□□□□□ -1.1
UBR1-203ENST00000562173 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
UBR1-203ENST00000562173 ZBTB7AO95365 584 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 WFDC8Q8IUA0 241 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 MAP4K3Q8IVH8 894 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 TRIM11Q96F44 468 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 TCF12Q99081 682 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 EHD4Q9H223 541 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.14□□□□□ -1.11
UBR1-203ENST00000562173 TUBGCP6Q96RT7 1819 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 LRRC37A3O60309 1634 aa8.14□□□□□ -1.11
UBR1-203ENST00000562173 SPATA31E1Q6ZUB1 1445 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
UBR1-203ENST00000562173 XRCC5P13010 732 aaKnown RBP8.13□□□□□ -1.11
UBR1-203ENST00000562173 ACPPP15309 386 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 ZC3H6P61129 1189 aaKnown RBP8.13□□□□□ -1.11
UBR1-203ENST00000562173 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
UBR1-203ENST00000562173 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
UBR1-203ENST00000562173 MSL1Q68DK7 614 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 EPS8L3Q8TE67 593 aaKnown RBP8.13□□□□□ -1.11
UBR1-203ENST00000562173 BSNDQ8WZ55 320 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 ZFYVE1Q9HBF4 777 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 TRIM33Q9UPN9 1127 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 LMO7Q8WWI1 1683 aa8.13□□□□□ -1.11
UBR1-203ENST00000562173 PIK3C2GO75747 1445 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 SPATA31A1Q5TZJ5 1347 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
UBR1-203ENST00000562173 ITPKAP23677 461 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 CDC27P30260 824 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 GRM2Q14416 872 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 GIPC2Q8TF65 315 aa8.12□□□□□ -1.11
UBR1-203ENST00000562173 WNT8BQ93098 351 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms