RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SNED1Q8TER0 1413 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 UBE2Q2LH0YL09 131 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 ORC4O43929 436 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 FOSBP53539 338 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 CBX1P83916 185 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 EZH2Q15910 746 aaKnown RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 MSL1Q68DK7 614 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 FBXO18Q8NFZ0 1043 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 SH3RF3Q8TEJ3 882 aaPredicted RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 ZKSCAN3Q9BRR0 538 aa11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 ORC3Q9UBD5 711 aaPredicted RBP11.92□□□□□ -0.5
TUBGCP4-202ENST00000561691 MYH15Q9Y2K3 1946 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 DLEC1Q9Y238 1755 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 ZBTB43O43298 467 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 LRSAM1Q6UWE0 723 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 NBPF11Q86T75 865 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 MICU3Q86XE3 530 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 STK11IPQ8N1F8 1099 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 CRNKL1Q9BZJ0 848 aaKnown RBP11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 RBSNQ9H1K0 784 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 CCDC39Q9UFE4 941 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 MROH7-TTC4A0A0A0MT08 1334 aa11.91□□□□□ -0.5
TUBGCP4-202ENST00000561691 ROBO3Q96MS0 1386 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 SYCE3A1L190 88 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 KIF28PB7ZC32 967 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 H3BQV1 296 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 RCAN1P53805 252 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 SLC15A2Q16348 729 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 DZIP1Q86YF9 867 aaKnown RBP11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 RCOR1Q9UKL0 485 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 GAKO14976 1311 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 STK36Q9NRP7 1315 aa11.9□□□□□ -0.5
TUBGCP4-202ENST00000561691 GPR75-ASB3A0A0A6YYF3 556 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 PRDM1O75626 825 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 USP17L8P0C7I0 530 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 PCP11498 1178 aaKnown RBP11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 LIG1P18858 919 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 RHBDL3P58872 404 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 C12orf60Q5U649 245 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 CCDC144CPQ8IYA2 1237 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 PHKBQ93100 1093 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 MASTLQ96GX5 879 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 PRIMPOLQ96LW4 560 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 SCAND2PQ9GZW5 306 aaPredicted RBP11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.51
TUBGCP4-202ENST00000561691 TNKSO95271 1327 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 IFNAR1P17181 557 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 PDE6BP35913 854 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 FUT2Q10981 343 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 WTAPQ15007 396 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 CERS5Q8N5B7 392 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 ESR2Q92731 530 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 SHISA4Q96DD7 197 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 USP28Q96RU2 1077 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
TUBGCP4-202ENST00000561691 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 KIF23Q02241 960 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 RCSD1Q6JBY9 416 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 ZNF654Q8IZM8 581 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 VGLL3A8MV65 326 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 CPLX1O14810 134 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 GSTO1P78417 241 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 TROAPQ12815 778 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 CCDC183Q5T5S1 534 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
TUBGCP4-202ENST00000561691 CCDC69A6NI79 296 aa11.87□□□□□ -0.51
TUBGCP4-202ENST00000561691 ALDH1B1P30837 517 aa11.87□□□□□ -0.51
TUBGCP4-202ENST00000561691 MFSD14BQ5SR56 506 aa11.87□□□□□ -0.51
TUBGCP4-202ENST00000561691 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
TUBGCP4-202ENST00000561691 TMTC2Q8N394 836 aa11.87□□□□□ -0.51
TUBGCP4-202ENST00000561691 CRACR2BQ8N4Y2 399 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms