RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 MOGSQ13724 837 aa31■■■□□ 2.55
NME3-202ENST00000561637 PRO3102Q9H379 93 aa31■■■□□ 2.55
NME3-202ENST00000561637 GSTO1P78417 241 aa30.99■■■□□ 2.55
NME3-202ENST00000561637 NOL9Q5SY16 702 aaKnown RBP30.99■■■□□ 2.55
NME3-202ENST00000561637 SH3RF3Q8TEJ3 882 aaPredicted RBP30.99■■■□□ 2.55
NME3-202ENST00000561637 IL1RAPL2Q9NP60 686 aa30.99■■■□□ 2.55
NME3-202ENST00000561637 ZBTB40Q9NUA8 1239 aa30.99■■■□□ 2.55
NME3-202ENST00000561637 MAST2Q6P0Q8 1798 aa30.99■■■□□ 2.55
NME3-202ENST00000561637 MYPNQ86TC9 1320 aa30.98■■■□□ 2.55
NME3-202ENST00000561637 GJB1P08034 283 aa30.98■■■□□ 2.55
NME3-202ENST00000561637 KCNH4Q9UQ05 1017 aa30.98■■■□□ 2.55
NME3-202ENST00000561637 APBB1O00213 710 aa30.97■■■□□ 2.55
NME3-202ENST00000561637 LDHCP07864 332 aa30.97■■■□□ 2.55
NME3-202ENST00000561637 HOXD10P28358 340 aa30.97■■■□□ 2.55
NME3-202ENST00000561637 AACSQ86V21 672 aa30.97■■■□□ 2.55
NME3-202ENST00000561637 NKX2-3Q8TAU0 364 aa30.97■■■□□ 2.55
NME3-202ENST00000561637 RNF208Q9H0X6 261 aa30.97■■■□□ 2.55
NME3-202ENST00000561637 MS4A1P11836 297 aa30.96■■■□□ 2.55
NME3-202ENST00000561637 NAA16Q6N069 864 aaPredicted RBP30.96■■■□□ 2.55
NME3-202ENST00000561637 CCDC84Q86UT8 332 aaPredicted RBP30.96■■■□□ 2.55
NME3-202ENST00000561637 TEX11Q8IYF3 940 aa30.96■■■□□ 2.55
NME3-202ENST00000561637 ZNF512BQ96KM6 892 aaPredicted RBP30.96■■■□□ 2.55
NME3-202ENST00000561637 AATFQ9NY61 560 aaKnown RBP eCLIP30.96■■■□□ 2.55
NME3-202ENST00000561637 MAP3K10Q02779 954 aa30.95■■■□□ 2.55
NME3-202ENST00000561637 PRKCZQ05513 592 aa30.95■■■□□ 2.55
NME3-202ENST00000561637 DDX19BQ9UMR2 479 aa30.95■■■□□ 2.55
NME3-202ENST00000561637 COL6A3P12111 3177 aa30.95■■■□□ 2.55
NME3-202ENST00000561637 HTATIP2Q9BUP3 242 aa30.94■■■□□ 2.54
NME3-202ENST00000561637 OSBPL5Q9H0X9 879 aaPredicted RBP30.94■■■□□ 2.54
NME3-202ENST00000561637 BIN2Q9UBW5 565 aaPredicted RBP30.94■■■□□ 2.54
NME3-202ENST00000561637 SCYL3Q8IZE3 742 aa30.93■■■□□ 2.54
NME3-202ENST00000561637 RHPN1Q8TCX5 695 aa30.93■■■□□ 2.54
NME3-202ENST00000561637 BCL11AQ9H165 835 aa30.93■■■□□ 2.54
NME3-202ENST00000561637 ANTXR1Q9H6X2 564 aa30.93■■■□□ 2.54
NME3-202ENST00000561637 GABRQQ9UN88 632 aa30.93■■■□□ 2.54
NME3-202ENST00000561637 CYP2C8P10632 490 aa30.92■■■□□ 2.54
NME3-202ENST00000561637 BCRP11274 1271 aa30.92■■■□□ 2.54
NME3-202ENST00000561637 GPAT2Q6NUI2 795 aa30.92■■■□□ 2.54
NME3-202ENST00000561637 DYNLL1P63167 89 aaKnown RBP30.91■■■□□ 2.54
NME3-202ENST00000561637 RRP1BQ14684 758 aaKnown RBP30.91■■■□□ 2.54
NME3-202ENST00000561637 ERC1Q8IUD2 1116 aa30.91■■■□□ 2.54
NME3-202ENST00000561637 U2AF1L4Q8WU68 220 aaKnown RBP30.91■■■□□ 2.54
NME3-202ENST00000561637 UNC93B1Q9H1C4 597 aa30.91■■■□□ 2.54
NME3-202ENST00000561637 ALPK3Q96L96 1907 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 DOCK3Q8IZD9 2030 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 SIPA1L1O43166 1804 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 NPM3O75607 178 aaKnown RBP30.9■■■□□ 2.54
NME3-202ENST00000561637 PTPRAP18433 802 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 UBXN2AP68543 259 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 ZHX2Q9Y6X8 837 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 DOCK1Q14185 1865 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 CDK5RAP2Q96SN8 1893 aa30.9■■■□□ 2.54
NME3-202ENST00000561637 PTPRFP10586 1907 aa30.89■■■□□ 2.54
NME3-202ENST00000561637 FARP2O94887 1054 aaPredicted RBP30.89■■■□□ 2.54
NME3-202ENST00000561637 MAPKAPK5Q8IW41 473 aa30.89■■■□□ 2.54
NME3-202ENST00000561637 RPAP2Q8IXW5 612 aaPredicted RBP30.89■■■□□ 2.54
NME3-202ENST00000561637 LAMA3Q16787 3333 aa30.89■■■□□ 2.54
NME3-202ENST00000561637 IDH1O75874 414 aaKnown RBP30.88■■■□□ 2.53
NME3-202ENST00000561637 FCGRTP55899 365 aa30.88■■■□□ 2.53
NME3-202ENST00000561637 PARK7Q99497 189 aaKnown RBP30.88■■■□□ 2.53
NME3-202ENST00000561637 PICK1Q9NRD5 415 aa30.88■■■□□ 2.53
NME3-202ENST00000561637 NR2E3Q9Y5X4 410 aa30.88■■■□□ 2.53
NME3-202ENST00000561637 PHIPQ8WWQ0 1821 aa30.88■■■□□ 2.53
NME3-202ENST00000561637 COL2A1P02458 1487 aaPredicted RBP30.88■■■□□ 2.53
NME3-202ENST00000561637 CYP7A1P22680 504 aa30.87■■■□□ 2.53
NME3-202ENST00000561637 PPP4CP60510 307 aa30.87■■■□□ 2.53
NME3-202ENST00000561637 TGFBRAP1Q8WUH2 860 aa30.87■■■□□ 2.53
NME3-202ENST00000561637 NOL10Q9BSC4 688 aaKnown RBP30.87■■■□□ 2.53
NME3-202ENST00000561637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.87■■■□□ 2.53
NME3-202ENST00000561637 SOX1O00570 391 aaPredicted RBP30.86■■■□□ 2.53
NME3-202ENST00000561637 SGPL1O95470 568 aa30.86■■■□□ 2.53
NME3-202ENST00000561637 MAP4K4O95819 1239 aaPredicted RBP30.86■■■□□ 2.53
NME3-202ENST00000561637 MIGA1Q8NAN2 632 aa30.86■■■□□ 2.53
NME3-202ENST00000561637 SLAIN1Q8ND83 568 aa30.86■■■□□ 2.53
NME3-202ENST00000561637 AFG3L2Q9Y4W6 797 aa30.86■■■□□ 2.53
NME3-202ENST00000561637 FLT1P17948 1338 aa30.85■■■□□ 2.53
NME3-202ENST00000561637 DLL1O00548 723 aa30.85■■■□□ 2.53
NME3-202ENST00000561637 CTNND1O60716 968 aaKnown RBP30.85■■■□□ 2.53
NME3-202ENST00000561637 HSP90AB4PQ58FF6 505 aa30.85■■■□□ 2.53
NME3-202ENST00000561637 MAGEB6Q8N7X4 407 aa30.85■■■□□ 2.53
NME3-202ENST00000561637 SLC17A8Q8NDX2 589 aa30.85■■■□□ 2.53
NME3-202ENST00000561637 CXCL11O14625 94 aa30.84■■■□□ 2.53
NME3-202ENST00000561637 TBC1D12O60347 775 aa30.84■■■□□ 2.53
NME3-202ENST00000561637 BAG3O95817 575 aa30.84■■■□□ 2.53
NME3-202ENST00000561637 ELNP15502 786 aa30.84■■■□□ 2.53
NME3-202ENST00000561637 KIF1BPQ96EK5 621 aa30.84■■■□□ 2.53
NME3-202ENST00000561637 SAP30BPQ9UHR5 308 aaKnown RBP30.84■■■□□ 2.53
NME3-202ENST00000561637 FOCADQ5VW36 1801 aa30.83■■■□□ 2.53
NME3-202ENST00000561637 A0A0G2JLL6 359 aaPredicted RBP30.83■■■□□ 2.53
NME3-202ENST00000561637 TRIM75PA6NK02 468 aa30.83■■■□□ 2.53
NME3-202ENST00000561637 ADCY3O60266 1144 aa30.83■■■□□ 2.53
NME3-202ENST00000561637 HMMRO75330 724 aa30.83■■■□□ 2.53
NME3-202ENST00000561637 SHROOM1Q2M3G4 852 aaPredicted RBP30.83■■■□□ 2.53
NME3-202ENST00000561637 PRRT2Q7Z6L0 340 aaPredicted RBP30.83■■■□□ 2.53
NME3-202ENST00000561637 DNAJC18Q9H819 358 aa30.83■■■□□ 2.53
NME3-202ENST00000561637 FLT3LGP49771 235 aa30.82■■■□□ 2.52
NME3-202ENST00000561637 JAG1P78504 1218 aa30.82■■■□□ 2.52
NME3-202ENST00000561637 PDE3AQ14432 1141 aa30.82■■■□□ 2.52
NME3-202ENST00000561637 GADL1Q6ZQY3 521 aa30.82■■■□□ 2.52
NME3-202ENST00000561637 EDC3Q96F86 508 aaKnown RBP30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms