RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 PAG1Q9NWQ8 432 aa28.92■■■□□ 2.22
CDR2-202ENST00000561630 RIOK1Q9BRS2 568 aaKnown RBP28.91■■■□□ 2.22
CDR2-202ENST00000561630 MOGSQ13724 837 aa28.9■■■□□ 2.22
CDR2-202ENST00000561630 PKN2Q16513 984 aaKnown RBP28.9■■■□□ 2.22
CDR2-202ENST00000561630 METTL16Q86W50 562 aaKnown RBP28.9■■■□□ 2.22
CDR2-202ENST00000561630 PALD1Q9ULE6 856 aa28.9■■■□□ 2.22
CDR2-202ENST00000561630 AFG3L2Q9Y4W6 797 aa28.9■■■□□ 2.22
CDR2-202ENST00000561630 ANKRD23Q86SG2 305 aa28.89■■■□□ 2.22
CDR2-202ENST00000561630 FOXP4Q8IVH2 680 aaPredicted RBP28.89■■■□□ 2.22
CDR2-202ENST00000561630 ECHDC1Q9NTX5 307 aa28.89■■■□□ 2.22
CDR2-202ENST00000561630 ZNF532Q9HCE3 1301 aa28.89■■■□□ 2.21
CDR2-202ENST00000561630 TCRBV5S4A2TA0A5A2 114 aa28.88■■■□□ 2.21
CDR2-202ENST00000561630 USP5P45974 858 aa28.88■■■□□ 2.21
CDR2-202ENST00000561630 SAP30BPQ9UHR5 308 aaKnown RBP28.88■■■□□ 2.21
CDR2-202ENST00000561630 MAGEB6P1A0A0J9YX57 407 aa28.87■■■□□ 2.21
CDR2-202ENST00000561630 CAP2P40123 477 aa28.87■■■□□ 2.21
CDR2-202ENST00000561630 SP3Q02447 781 aa28.87■■■□□ 2.21
CDR2-202ENST00000561630 RRP1BQ14684 758 aaKnown RBP28.87■■■□□ 2.21
CDR2-202ENST00000561630 A0A0G2JLL6 359 aaPredicted RBP28.86■■■□□ 2.21
CDR2-202ENST00000561630 CCDC85CA6NKD9 419 aa28.86■■■□□ 2.21
CDR2-202ENST00000561630 HLA-DOAP06340 250 aa28.86■■■□□ 2.21
CDR2-202ENST00000561630 PRRT2Q7Z6L0 340 aaPredicted RBP28.86■■■□□ 2.21
CDR2-202ENST00000561630 ERO1AQ96HE7 468 aa28.86■■■□□ 2.21
CDR2-202ENST00000561630 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.86■■■□□ 2.21
CDR2-202ENST00000561630 TLR2O60603 784 aa28.85■■■□□ 2.21
CDR2-202ENST00000561630 CRACR2BQ8N4Y2 399 aaPredicted RBP28.85■■■□□ 2.21
CDR2-202ENST00000561630 GPATCH3Q96I76 525 aa28.85■■■□□ 2.21
CDR2-202ENST00000561630 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.85■■■□□ 2.21
CDR2-202ENST00000561630 DNAJC18Q9H819 358 aa28.85■■■□□ 2.21
CDR2-202ENST00000561630 PDHXO00330 501 aa28.84■■■□□ 2.21
CDR2-202ENST00000561630 ADD2P35612 726 aa28.84■■■□□ 2.21
CDR2-202ENST00000561630 GPAT2Q6NUI2 795 aa28.84■■■□□ 2.21
CDR2-202ENST00000561630 FASTKD5Q7L8L6 764 aaKnown RBP28.84■■■□□ 2.21
CDR2-202ENST00000561630 AAMPQ13685 434 aa28.83■■■□□ 2.21
CDR2-202ENST00000561630 CCDC84Q86UT8 332 aaPredicted RBP28.83■■■□□ 2.21
CDR2-202ENST00000561630 TRIM34Q9BYJ4 488 aa28.83■■■□□ 2.21
CDR2-202ENST00000561630 CRNKL1Q9BZJ0 848 aaKnown RBP28.83■■■□□ 2.21
CDR2-202ENST00000561630 TRIM75PA6NK02 468 aa28.82■■■□□ 2.2
CDR2-202ENST00000561630 FBXO46Q6PJ61 603 aaPredicted RBP28.82■■■□□ 2.2
CDR2-202ENST00000561630 CD99L2Q8TCZ2 262 aa28.82■■■□□ 2.2
CDR2-202ENST00000561630 TBC1D2Q9BYX2 928 aa28.82■■■□□ 2.2
CDR2-202ENST00000561630 FOCADQ5VW36 1801 aa28.82■■■□□ 2.2
CDR2-202ENST00000561630 DOCK1Q14185 1865 aa28.81■■■□□ 2.2
CDR2-202ENST00000561630 SLC4A8Q2Y0W8 1093 aa28.81■■■□□ 2.2
CDR2-202ENST00000561630 OTOP1Q7RTM1 612 aa28.81■■■□□ 2.2
CDR2-202ENST00000561630 EHD4Q9H223 541 aa28.81■■■□□ 2.2
CDR2-202ENST00000561630 HPS5Q9UPZ3 1129 aa28.81■■■□□ 2.2
CDR2-202ENST00000561630 TRIM17Q9Y577 477 aa28.81■■■□□ 2.2
CDR2-202ENST00000561630 CDK5RAP2Q96SN8 1893 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 USP17L5A8MUK1 530 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 HDAC1Q13547 482 aaPredicted RBP28.8■■■□□ 2.2
CDR2-202ENST00000561630 UBE3CQ15386 1083 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 SLFNL1Q499Z3 407 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 TTC6Q86TZ1 520 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 LCORLQ8N3X6 602 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 ZNF280CQ8ND82 737 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 SIPA1L1O43166 1804 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 HTTP42858 3142 aa28.8■■■□□ 2.2
CDR2-202ENST00000561630 ASNSP08243 561 aa28.79■■■□□ 2.2
CDR2-202ENST00000561630 TSHZ3Q63HK5 1081 aa28.79■■■□□ 2.2
CDR2-202ENST00000561630 GINM1Q9NU53 330 aa28.79■■■□□ 2.2
CDR2-202ENST00000561630 SERPINB13Q9UIV8 391 aa28.79■■■□□ 2.2
CDR2-202ENST00000561630 JAG1P78504 1218 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 CAP1Q01518 475 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 SPP2Q13103 211 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 ZSCAN25Q6NSZ9 544 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 C17orf99Q6UX52 265 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 GADL1Q6ZQY3 521 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 PARK7Q99497 189 aaKnown RBP28.78■■■□□ 2.2
CDR2-202ENST00000561630 ARMT1Q9H993 441 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 EFCC1Q9HA90 598 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 SLC45A1Q9Y2W3 748 aa28.78■■■□□ 2.2
CDR2-202ENST00000561630 TTC41PQ6P2S7 1318 aa28.77■■■□□ 2.2
CDR2-202ENST00000561630 ADGRA2Q96PE1 1338 aa28.77■■■□□ 2.2
CDR2-202ENST00000561630 CHGBP05060 677 aa28.77■■■□□ 2.2
CDR2-202ENST00000561630 DCP1AQ9NPI6 582 aaPredicted RBP28.77■■■□□ 2.2
CDR2-202ENST00000561630 MBD4O95243 580 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 PLCD1P51178 756 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 ARHGEF6Q15052 776 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 TATDN1Q6P1N9 297 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 KBTBD3Q8NAB2 608 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 SDR42E1Q8WUS8 393 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 GCC1Q96CN9 775 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 WDR18Q9BV38 432 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 AS3MTQ9HBK9 375 aa28.76■■■□□ 2.19
CDR2-202ENST00000561630 GDF11O95390 407 aa28.75■■■□□ 2.19
CDR2-202ENST00000561630 POLR3DP05423 398 aaPredicted RBP28.75■■■□□ 2.19
CDR2-202ENST00000561630 CYP2C8P10632 490 aa28.75■■■□□ 2.19
CDR2-202ENST00000561630 PROCA1Q8NCQ7 364 aaPredicted RBP28.75■■■□□ 2.19
CDR2-202ENST00000561630 OTUD7AQ8TE49 926 aaPredicted RBP28.75■■■□□ 2.19
CDR2-202ENST00000561630 MCM9Q9NXL9 1143 aa28.75■■■□□ 2.19
CDR2-202ENST00000561630 CPA4Q9UI42 421 aa28.75■■■□□ 2.19
CDR2-202ENST00000561630 ZBTB21Q9ULJ3 1066 aa28.75■■■□□ 2.19
CDR2-202ENST00000561630 AGTPBP1Q9UPW5 1226 aa28.75■■■□□ 2.19
CDR2-202ENST00000561630 LACTBP83111 547 aaPredicted RBP28.74■■■□□ 2.19
CDR2-202ENST00000561630 SHROOM1Q2M3G4 852 aaPredicted RBP28.74■■■□□ 2.19
CDR2-202ENST00000561630 PHIPQ8WWQ0 1821 aa28.73■■■□□ 2.19
CDR2-202ENST00000561630 ERC2O15083 957 aa28.73■■■□□ 2.19
CDR2-202ENST00000561630 HMGCS2P54868 508 aa28.73■■■□□ 2.19
CDR2-202ENST00000561630 SH3D19Q5HYK7 790 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms