RNA–Protein interactions for RNA: ENST00000561521.1

LINC00662-201, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-201ENST00000561521 RTEL1Q9NZ71 1219 aa11.31□□□□□ -0.6
LINC00662-201ENST00000561521 HPCAL4Q9UM19 191 aa11.31□□□□□ -0.6
LINC00662-201ENST00000561521 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
LINC00662-201ENST00000561521 C15orf41Q9Y2V0 281 aa11.31□□□□□ -0.6
LINC00662-201ENST00000561521 NSD2O96028 1365 aa11.31□□□□□ -0.6
LINC00662-201ENST00000561521 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 LRRIQ3A6PVS8 624 aaPredicted RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 LACTB2Q53H82 288 aaPredicted RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 CEP57L1Q8IYX8 460 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 ZWILCHQ9H900 591 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 ZNF510Q9Y2H8 683 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 CARNS1A5YM72 827 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 CREB3O43889 395 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 SKAP2O75563 359 aaPredicted RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 VIMP08670 466 aaKnown RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 DCCP43146 1447 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 WHAMMP3Q1A5X7 153 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 CMPK2Q5EBM0 449 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 C6orf89Q6UWU4 347 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 SIRT2Q8IXJ6 389 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 SMYD1Q8NB12 490 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 ZCRB1Q8TBF4 217 aaKnown RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 ZSCAN31Q96LW9 406 aaPredicted RBP11.3□□□□□ -0.6
LINC00662-201ENST00000561521 PNKPQ96T60 521 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 KIAA1210Q9ULL0 1709 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 TMEM98Q9Y2Y6 226 aa11.3□□□□□ -0.6
LINC00662-201ENST00000561521 ABCC4O15439 1325 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 F8VZ95 297 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 DNAJC8O75937 253 aaPredicted RBP11.29□□□□□ -0.6
LINC00662-201ENST00000561521 NAT1P18440 290 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 PIP4K2BP78356 416 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 CKAP2LQ8IYA6 745 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 TMOD4Q9NZQ9 345 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 SPATA7Q9P0W8 599 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 TPCN1Q9ULQ1 816 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
LINC00662-201ENST00000561521 WDHD1O75717 1129 aaPredicted RBP11.29□□□□□ -0.6
LINC00662-201ENST00000561521 LINGO3P0C6S8 592 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 HARSP12081 509 aaKnown RBP11.29□□□□□ -0.6
LINC00662-201ENST00000561521 TTC14Q96N46 770 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
LINC00662-201ENST00000561521 SH2B1Q9NRF2 756 aaPredicted RBP11.29□□□□□ -0.6
LINC00662-201ENST00000561521 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 PPP2R2CQ9Y2T4 447 aa11.29□□□□□ -0.6
LINC00662-201ENST00000561521 GHRP10912 638 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 CCDC15Q0P6D6 951 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 MYBPC3Q14896 1274 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
LINC00662-201ENST00000561521 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 TMCO1Q9UM00 188 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 LIMCH1Q9UPQ0 1083 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
LINC00662-201ENST00000561521 FRMD3A2A2Y4 597 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 PDCP20941 246 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 PSMC4P43686 418 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 CCNG1P51959 295 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 SESN3P58005 492 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 GNG11P61952 73 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 GNGT1P63211 74 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 ARMC3Q5W041 872 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 DHX58Q96C10 678 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 ZFATQ9P243 1243 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 BARX2Q9UMQ3 279 aaPredicted RBP11.28□□□□□ -0.6
LINC00662-201ENST00000561521 ATP8A1Q9Y2Q0 1164 aa11.28□□□□□ -0.6
LINC00662-201ENST00000561521 GPR75-ASB3A0A0A6YYF3 556 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 GOLGA6L4A6NEF3 574 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 CBFA2T2O43439 604 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 PDHBP11177 359 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 GNAT1P11488 350 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 VSNL1P62760 191 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 STIM1Q13586 685 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 LBRQ14739 615 aaKnown RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 POSTNQ15063 836 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 C11orf57Q6ZUT1 292 aaPredicted RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 LCA5Q86VQ0 697 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 CCAR1Q8IX12 1150 aaKnown RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 ASB3Q9Y575 518 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 IPO5O00410 1097 aaKnown RBP11.27□□□□□ -0.61
LINC00662-201ENST00000561521 IDO1P14902 403 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 CAMK4Q16566 473 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 TMC6Q7Z403 805 aa11.27□□□□□ -0.61
LINC00662-201ENST00000561521 C1orf131Q8NDD1 294 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms