RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 ZFYVE28Q9HCC9 887 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 PICK1Q9NRD5 415 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 ZHX2Q9Y6X8 837 aa25.1■■□□□ 1.61
TPM1-232ENST00000561425 MIGA1Q8NAN2 632 aa25.09■■□□□ 1.61
TPM1-232ENST00000561425 EDC3Q96F86 508 aaKnown RBP25.09■■□□□ 1.61
TPM1-232ENST00000561425 DNAJC2Q99543 621 aaKnown RBP25.09■■□□□ 1.61
TPM1-232ENST00000561425 PAG1Q9NWQ8 432 aa25.09■■□□□ 1.61
TPM1-232ENST00000561425 FAM196BA6NMK8 535 aa25.08■■□□□ 1.61
TPM1-232ENST00000561425 CAP2P40123 477 aa25.08■■□□□ 1.61
TPM1-232ENST00000561425 TAF1CQ15572 869 aaPredicted RBP25.08■■□□□ 1.61
TPM1-232ENST00000561425 DNAJC18Q9H819 358 aa25.08■■□□□ 1.61
TPM1-232ENST00000561425 PALD1Q9ULE6 856 aa25.08■■□□□ 1.61
TPM1-232ENST00000561425 A0A0G2JLL6 359 aaPredicted RBP25.07■■□□□ 1.6
TPM1-232ENST00000561425 TLR2O60603 784 aa25.07■■□□□ 1.6
TPM1-232ENST00000561425 GPAT2Q6NUI2 795 aa25.07■■□□□ 1.6
TPM1-232ENST00000561425 PRRT2Q7Z6L0 340 aaPredicted RBP25.07■■□□□ 1.6
TPM1-232ENST00000561425 ECHDC1Q9NTX5 307 aa25.07■■□□□ 1.6
TPM1-232ENST00000561425 SP3Q02447 781 aa25.06■■□□□ 1.6
TPM1-232ENST00000561425 FOCADQ5VW36 1801 aa25.06■■□□□ 1.6
TPM1-232ENST00000561425 ZNF532Q9HCE3 1301 aa25.06■■□□□ 1.6
TPM1-232ENST00000561425 CDK5RAP2Q96SN8 1893 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 ADD2P35612 726 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 CAP1Q01518 475 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 AAMPQ13685 434 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 ERO1AQ96HE7 468 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 TBC1D2Q9BYX2 928 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 SIPA1L1O43166 1804 aa25.05■■□□□ 1.6
TPM1-232ENST00000561425 MAGEB6P1A0A0J9YX57 407 aa25.04■■□□□ 1.6
TPM1-232ENST00000561425 PDHXO00330 501 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 USP5P45974 858 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 UBE3CQ15386 1083 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 FBXO46Q6PJ61 603 aaPredicted RBP25.03■■□□□ 1.6
TPM1-232ENST00000561425 FASTKD5Q7L8L6 764 aaKnown RBP25.03■■□□□ 1.6
TPM1-232ENST00000561425 OTOP1Q7RTM1 612 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 BCL11AQ9H165 835 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 EHD4Q9H223 541 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 GINM1Q9NU53 330 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.03■■□□□ 1.6
TPM1-232ENST00000561425 ADGRA2Q96PE1 1338 aa25.03■■□□□ 1.6
TPM1-232ENST00000561425 CCDC85CA6NKD9 419 aa25.02■■□□□ 1.6
TPM1-232ENST00000561425 JAG1P78504 1218 aa25.02■■□□□ 1.6
TPM1-232ENST00000561425 HDAC1Q13547 482 aaPredicted RBP25.02■■□□□ 1.6
TPM1-232ENST00000561425 TATDN1Q6P1N9 297 aa25.02■■□□□ 1.6
TPM1-232ENST00000561425 C17orf99Q6UX52 265 aa25.02■■□□□ 1.6
TPM1-232ENST00000561425 SAP30BPQ9UHR5 308 aaKnown RBP25.02■■□□□ 1.6
TPM1-232ENST00000561425 SLC45A1Q9Y2W3 748 aa25.02■■□□□ 1.6
TPM1-232ENST00000561425 DOCK1Q14185 1865 aa25.02■■□□□ 1.6
TPM1-232ENST00000561425 PHIPQ8WWQ0 1821 aa25.01■■□□□ 1.59
TPM1-232ENST00000561425 HLA-DOAP06340 250 aa25.01■■□□□ 1.59
TPM1-232ENST00000561425 RGS19P49795 217 aa25.01■■□□□ 1.59
TPM1-232ENST00000561425 CD99L2Q8TCZ2 262 aa25.01■■□□□ 1.59
TPM1-232ENST00000561425 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.01■■□□□ 1.59
TPM1-232ENST00000561425 HPS5Q9UPZ3 1129 aa25.01■■□□□ 1.59
TPM1-232ENST00000561425 USP17L5A8MUK1 530 aa25■■□□□ 1.59
TPM1-232ENST00000561425 SLFNL1Q499Z3 407 aa25■■□□□ 1.59
TPM1-232ENST00000561425 TTC6Q86TZ1 520 aa25■■□□□ 1.59
TPM1-232ENST00000561425 CCDC84Q86UT8 332 aaPredicted RBP25■■□□□ 1.59
TPM1-232ENST00000561425 ZNF280CQ8ND82 737 aa25■■□□□ 1.59
TPM1-232ENST00000561425 WDR18Q9BV38 432 aa25■■□□□ 1.59
TPM1-232ENST00000561425 CRNKL1Q9BZJ0 848 aaKnown RBP25■■□□□ 1.59
TPM1-232ENST00000561425 ASNSP08243 561 aa24.99■■□□□ 1.59
TPM1-232ENST00000561425 SH3D19Q5HYK7 790 aa24.99■■□□□ 1.59
TPM1-232ENST00000561425 LCORLQ8N3X6 602 aa24.99■■□□□ 1.59
TPM1-232ENST00000561425 SERPINB13Q9UIV8 391 aa24.99■■□□□ 1.59
TPM1-232ENST00000561425 TRIM17Q9Y577 477 aa24.99■■□□□ 1.59
TPM1-232ENST00000561425 TTC41PQ6P2S7 1318 aa24.98■■□□□ 1.59
TPM1-232ENST00000561425 SALL3Q9BXA9 1300 aa24.98■■□□□ 1.59
TPM1-232ENST00000561425 TRIM75PA6NK02 468 aa24.98■■□□□ 1.59
TPM1-232ENST00000561425 GABPAQ06546 454 aa24.98■■□□□ 1.59
TPM1-232ENST00000561425 SPP2Q13103 211 aa24.98■■□□□ 1.59
TPM1-232ENST00000561425 CRACR2BQ8N4Y2 399 aaPredicted RBP24.98■■□□□ 1.59
TPM1-232ENST00000561425 CHGBP05060 677 aa24.97■■□□□ 1.59
TPM1-232ENST00000561425 PLCD1P51178 756 aa24.97■■□□□ 1.59
TPM1-232ENST00000561425 PROCA1Q8NCQ7 364 aaPredicted RBP24.97■■□□□ 1.59
TPM1-232ENST00000561425 GCC1Q96CN9 775 aa24.97■■□□□ 1.59
TPM1-232ENST00000561425 GPATCH3Q96I76 525 aa24.97■■□□□ 1.59
TPM1-232ENST00000561425 EFCC1Q9HA90 598 aa24.97■■□□□ 1.59
TPM1-232ENST00000561425 DCP1AQ9NPI6 582 aaPredicted RBP24.97■■□□□ 1.59
TPM1-232ENST00000561425 PTPN22Q9Y2R2 807 aa24.97■■□□□ 1.59
TPM1-232ENST00000561425 LACTBP83111 547 aaPredicted RBP24.96■■□□□ 1.59
TPM1-232ENST00000561425 ZSCAN25Q6NSZ9 544 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 KBTBD3Q8NAB2 608 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 PI4K2BQ8TCG2 481 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 PARK7Q99497 189 aaKnown RBP24.96■■□□□ 1.59
TPM1-232ENST00000561425 ARMT1Q9H993 441 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 AS3MTQ9HBK9 375 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 TAOK2Q9UL54 1235 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 AGTPBP1Q9UPW5 1226 aa24.96■■□□□ 1.59
TPM1-232ENST00000561425 BCRP11274 1271 aa24.95■■□□□ 1.58
TPM1-232ENST00000561425 SHROOM1Q2M3G4 852 aaPredicted RBP24.95■■□□□ 1.58
TPM1-232ENST00000561425 OTUD7AQ8TE49 926 aaPredicted RBP24.95■■□□□ 1.58
TPM1-232ENST00000561425 SDR42E1Q8WUS8 393 aa24.95■■□□□ 1.58
TPM1-232ENST00000561425 ATP8A2Q9NTI2 1148 aa24.95■■□□□ 1.58
TPM1-232ENST00000561425 ZBTB21Q9ULJ3 1066 aa24.95■■□□□ 1.58
TPM1-232ENST00000561425 DDX60LQ5H9U9 1706 aaKnown RBP24.95■■□□□ 1.58
TPM1-232ENST00000561425 MBD4O95243 580 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 CYP2C8P10632 490 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 ARHGEF6Q15052 776 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 TSHZ3Q63HK5 1081 aa24.94■■□□□ 1.58
TPM1-232ENST00000561425 GADL1Q6ZQY3 521 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms