RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 ZHX2Q9Y6X8 837 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 FLT1P17948 1338 aa20.99■□□□□ 0.95
CDC42BPB-208ENST00000561271 CTNND1O60716 968 aaKnown RBP20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 PPP4CP60510 307 aa20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 DYNLL1P63167 89 aaKnown RBP20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 ANKRD23Q86SG2 305 aa20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 CLASRPQ8N2M8 674 aaKnown RBP20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 MAGEB6Q8N7X4 407 aa20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 TGFBRAP1Q8WUH2 860 aa20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 EFCC1Q9HA90 598 aa20.98■□□□□ 0.95
CDC42BPB-208ENST00000561271 PDHXO00330 501 aa20.97■□□□□ 0.95
CDC42BPB-208ENST00000561271 TBC1D12O60347 775 aa20.97■□□□□ 0.95
CDC42BPB-208ENST00000561271 TLR2O60603 784 aa20.97■□□□□ 0.95
CDC42BPB-208ENST00000561271 MLLT1Q03111 559 aaPredicted RBP20.97■□□□□ 0.95
CDC42BPB-208ENST00000561271 MIGA1Q8NAN2 632 aa20.97■□□□□ 0.95
CDC42BPB-208ENST00000561271 IFIT2P09913 472 aaKnown RBP20.96■□□□□ 0.95
CDC42BPB-208ENST00000561271 ADGRA2Q96PE1 1338 aa20.96■□□□□ 0.95
CDC42BPB-208ENST00000561271 A0A0G2JLL6 359 aaPredicted RBP20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 CXCL11O14625 94 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 IGSF3O75054 1194 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 RAB11FIP3O75154 756 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 RRP1BQ14684 758 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 SLC4A8Q2Y0W8 1093 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 PRRT2Q7Z6L0 340 aaPredicted RBP20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 ARHGAP39Q9C0H5 1083 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 SAP30BPQ9UHR5 308 aaKnown RBP20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 PTPN22Q9Y2R2 807 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 AFG3L2Q9Y4W6 797 aa20.95■□□□□ 0.94
CDC42BPB-208ENST00000561271 TRIM75PA6NK02 468 aa20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 ECM2O94769 699 aaPredicted RBP20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 MAP3K12Q12852 859 aa20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 GPAT2Q6NUI2 795 aa20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 GADL1Q6ZQY3 521 aa20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 DNAJC2Q99543 621 aaKnown RBP20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 CPA4Q9UI42 421 aa20.94■□□□□ 0.94
CDC42BPB-208ENST00000561271 LACTBP83111 547 aaPredicted RBP20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 PARK7Q99497 189 aaKnown RBP20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 DHX36Q9H2U1 1008 aaKnown RBP20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 DNAJC18Q9H819 358 aa20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 PI4KBQ9UBF8 816 aa20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 HERC5Q9UII4 1024 aaKnown RBP20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 PALD1Q9ULE6 856 aa20.93■□□□□ 0.94
CDC42BPB-208ENST00000561271 GOLIM4O00461 696 aa20.92■□□□□ 0.94
CDC42BPB-208ENST00000561271 CYP2C8P10632 490 aa20.92■□□□□ 0.94
CDC42BPB-208ENST00000561271 EDC3Q96F86 508 aaKnown RBP20.92■□□□□ 0.94
CDC42BPB-208ENST00000561271 CAP2P40123 477 aa20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 BRCA2P51587 3418 aa20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 TTF1Q15361 905 aaPredicted RBP20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 C17orf99Q6UX52 265 aa20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 FASTKD5Q7L8L6 764 aaKnown RBP20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 CRACR2BQ8N4Y2 399 aaPredicted RBP20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 PTCH2Q9Y6C5 1203 aa20.91■□□□□ 0.94
CDC42BPB-208ENST00000561271 SMARCA5O60264 1052 aaPredicted RBP20.9■□□□□ 0.94
CDC42BPB-208ENST00000561271 PDE6AP16499 860 aa20.9■□□□□ 0.94
CDC42BPB-208ENST00000561271 USP5P45974 858 aa20.9■□□□□ 0.94
CDC42BPB-208ENST00000561271 KIF22Q14807 665 aa20.9■□□□□ 0.94
CDC42BPB-208ENST00000561271 TRIM34Q9BYJ4 488 aa20.9■□□□□ 0.94
CDC42BPB-208ENST00000561271 PLXNB2O15031 1838 aa20.9■□□□□ 0.94
CDC42BPB-208ENST00000561271 HLA-DOAP06340 250 aa20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 CTGFP29279 349 aa20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 ARHGEF6Q15052 776 aa20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 SHROOM1Q2M3G4 852 aaPredicted RBP20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 CERS3Q8IU89 383 aa20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 YTHDC1Q96MU7 727 aaKnown RBP20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 LRRCC1Q9C099 1032 aa20.89■□□□□ 0.93
CDC42BPB-208ENST00000561271 PARP14Q460N5 1801 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 ZNF532Q9HCE3 1301 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 GDF11O95390 407 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 SPP2Q13103 211 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 TREML2Q5T2D2 321 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 SLC9C2Q5TAH2 1124 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 ZNF280CQ8ND82 737 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 RIOK1Q9BRS2 568 aaKnown RBP20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 BOLA2Q9H3K6 86 aa20.88■□□□□ 0.93
CDC42BPB-208ENST00000561271 MAGEB6P1A0A0J9YX57 407 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 BCRP11274 1271 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 HMGCS2P54868 508 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 JAG1P78504 1218 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 TMED8Q6PL24 325 aaPredicted RBP20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 METTL16Q86W50 562 aaKnown RBP20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 PAG1Q9NWQ8 432 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 AGTPBP1Q9UPW5 1226 aa20.87■□□□□ 0.93
CDC42BPB-208ENST00000561271 USP17L5A8MUK1 530 aa20.86■□□□□ 0.93
CDC42BPB-208ENST00000561271 ATP5JP18859 108 aa20.86■□□□□ 0.93
CDC42BPB-208ENST00000561271 RRP1P56182 461 aaKnown RBP20.86■□□□□ 0.93
CDC42BPB-208ENST00000561271 FOXP4Q8IVH2 680 aaPredicted RBP20.86■□□□□ 0.93
CDC42BPB-208ENST00000561271 TRIM47Q96LD4 638 aa20.86■□□□□ 0.93
CDC42BPB-208ENST00000561271 SLC45A1Q9Y2W3 748 aa20.86■□□□□ 0.93
CDC42BPB-208ENST00000561271 TCRBV5S4A2TA0A5A2 114 aa20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 ASNSP08243 561 aa20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 PSMC4P43686 418 aa20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 SLFNL1Q499Z3 407 aa20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 SLC9C1Q4G0N8 1177 aa20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 PROCA1Q8NCQ7 364 aaPredicted RBP20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 SMCR8Q8TEV9 937 aaPredicted RBP20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 TBC1D2Q9BYX2 928 aa20.85■□□□□ 0.93
CDC42BPB-208ENST00000561271 AS3MTQ9HBK9 375 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms