RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 ZCCHC17Q9NP64 241 aaKnown RBP16.37■□□□□ 0.21
SHF-210ENST00000561239 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
SHF-210ENST00000561239 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
SHF-210ENST00000561239 ZNF532Q9HCE3 1301 aa16.37■□□□□ 0.21
SHF-210ENST00000561239 LAMB1P07942 1786 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 CCL15-CCL14A0A0B4J2E2 113 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 GPR25O00155 361 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 NEFLP07196 543 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 CCL15Q16663 113 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
SHF-210ENST00000561239 SCYL3Q8IZE3 742 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
SHF-210ENST00000561239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHF-210ENST00000561239 PHF20L1A8MW92 1017 aa16.35■□□□□ 0.21
SHF-210ENST00000561239 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
SHF-210ENST00000561239 IRF6O14896 467 aa16.35■□□□□ 0.21
SHF-210ENST00000561239 CHGBP05060 677 aa16.35■□□□□ 0.21
SHF-210ENST00000561239 DYNLL1P63167 89 aaKnown RBP16.35■□□□□ 0.21
SHF-210ENST00000561239 TICAM2Q86XR7 235 aa16.35■□□□□ 0.21
SHF-210ENST00000561239 FOXP4Q8IVH2 680 aaPredicted RBP16.35■□□□□ 0.21
SHF-210ENST00000561239 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
SHF-210ENST00000561239 FOCADQ5VW36 1801 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 CXCL11O14625 94 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 FKTNO75072 461 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 USP5P45974 858 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 DGKZQ13574 1117 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 PKN2Q16513 984 aaKnown RBP16.34■□□□□ 0.21
SHF-210ENST00000561239 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 ZSCAN25Q6NSZ9 544 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
SHF-210ENST00000561239 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 ZNF296Q8WUU4 475 aaPredicted RBP16.34■□□□□ 0.21
SHF-210ENST00000561239 BRI3BPQ8WY22 251 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 PTPN18Q99952 460 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 TBC1D2Q9BYX2 928 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 MYH7P12883 1935 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 FLT1P17948 1338 aa16.34■□□□□ 0.21
SHF-210ENST00000561239 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
SHF-210ENST00000561239 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
SHF-210ENST00000561239 MAPKAPK5Q8IW41 473 aa16.33■□□□□ 0.2
SHF-210ENST00000561239 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
SHF-210ENST00000561239 KCNH4Q9UQ05 1017 aa16.33■□□□□ 0.2
SHF-210ENST00000561239 CASP8AP2Q9UKL3 1982 aa16.33■□□□□ 0.2
SHF-210ENST00000561239 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
SHF-210ENST00000561239 PTPRAP18433 802 aa16.32■□□□□ 0.2
SHF-210ENST00000561239 CRHR2Q13324 411 aa16.32■□□□□ 0.2
SHF-210ENST00000561239 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
SHF-210ENST00000561239 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
SHF-210ENST00000561239 ABHD8Q96I13 439 aa16.32■□□□□ 0.2
SHF-210ENST00000561239 CRNKL1Q9BZJ0 848 aaKnown RBP16.32■□□□□ 0.2
SHF-210ENST00000561239 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
SHF-210ENST00000561239 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
SHF-210ENST00000561239 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
SHF-210ENST00000561239 RNF113AO15541 343 aaKnown RBP16.31■□□□□ 0.2
SHF-210ENST00000561239 ARHGEF6Q15052 776 aa16.31■□□□□ 0.2
SHF-210ENST00000561239 TAF1CQ15572 869 aaPredicted RBP16.31■□□□□ 0.2
SHF-210ENST00000561239 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
SHF-210ENST00000561239 LCORLQ8N3X6 602 aa16.31■□□□□ 0.2
SHF-210ENST00000561239 APPBP2Q92624 585 aa16.31■□□□□ 0.2
SHF-210ENST00000561239 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
SHF-210ENST00000561239 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
SHF-210ENST00000561239 LRRFIP1Q32MZ4 808 aaKnown RBP16.3■□□□□ 0.2
SHF-210ENST00000561239 ANKRD23Q86SG2 305 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 TTC6Q86TZ1 520 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 ERO1AQ96HE7 468 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 CCDC136Q96JN2 1154 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
SHF-210ENST00000561239 BTBD19C9JJ37 291 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 MBD4O95243 580 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
SHF-210ENST00000561239 CAP2P40123 477 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 SP3Q02447 781 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 ZMYM1Q5SVZ6 1142 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 FSD1Q9BTV5 496 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
SHF-210ENST00000561239 SIPA1L1O43166 1804 aa16.29■□□□□ 0.2
SHF-210ENST00000561239 CAPN15O75808 1086 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 ASNSP08243 561 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 TTC22Q5TAA0 569 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 DDRGK1Q96HY6 314 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 STRBPQ96SI9 672 aaKnown RBP16.28■□□□□ 0.2
SHF-210ENST00000561239 EHD4Q9H223 541 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
SHF-210ENST00000561239 A0A0G2JLL6 359 aaPredicted RBP16.27■□□□□ 0.2
SHF-210ENST00000561239 FAM196BA6NMK8 535 aa16.27■□□□□ 0.2
SHF-210ENST00000561239 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
SHF-210ENST00000561239 PDHXO00330 501 aa16.27■□□□□ 0.2
SHF-210ENST00000561239 TLR2O60603 784 aa16.27■□□□□ 0.2
SHF-210ENST00000561239 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.2
SHF-210ENST00000561239 PRRT2Q7Z6L0 340 aaPredicted RBP16.27■□□□□ 0.2
SHF-210ENST00000561239 SERPINB13Q9UIV8 391 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms