RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CYP2D6P10635 497 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 SEC23AQ15436 765 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
HDDC3-206ENST00000561036 MCTP1Q6DN14 999 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
HDDC3-206ENST00000561036 ZDHHC15Q96MV8 337 aa20.04■□□□□ 0.8
HDDC3-206ENST00000561036 DDX60LQ5H9U9 1706 aaKnown RBP20.04■□□□□ 0.8
HDDC3-206ENST00000561036 FLT1P17948 1338 aa20.03■□□□□ 0.8
HDDC3-206ENST00000561036 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
HDDC3-206ENST00000561036 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-206ENST00000561036 TRAK2O60296 914 aa20.03■□□□□ 0.8
HDDC3-206ENST00000561036 RANBP6O60518 1105 aaKnown RBP20.03■□□□□ 0.8
HDDC3-206ENST00000561036 DALRD3Q5D0E6 543 aaKnown RBP20.03■□□□□ 0.8
HDDC3-206ENST00000561036 MAPKAPK5Q8IW41 473 aa20.03■□□□□ 0.8
HDDC3-206ENST00000561036 SGIP1Q9BQI5 828 aa20.03■□□□□ 0.8
HDDC3-206ENST00000561036 ZNF646O15015 1829 aaPredicted RBP20.03■□□□□ 0.8
HDDC3-206ENST00000561036 FOCADQ5VW36 1801 aa20.03■□□□□ 0.8
HDDC3-206ENST00000561036 TNKSO95271 1327 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 GOLGA8AA7E2F4 631 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 F8W031 263 aaPredicted RBP20.02■□□□□ 0.8
HDDC3-206ENST00000561036 SMIM22K7EJ46 135 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 DDX11Q96FC9 970 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 SENP2Q9HC62 589 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 KCNQ5Q9NR82 932 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 SERPINA10Q9UK55 444 aa20.02■□□□□ 0.8
HDDC3-206ENST00000561036 CRKP46108 304 aa20.01■□□□□ 0.79
HDDC3-206ENST00000561036 APOBEC3HQ6NTF7 200 aaKnown RBP20.01■□□□□ 0.79
HDDC3-206ENST00000561036 ENAHQ8N8S7 591 aaPredicted RBP20.01■□□□□ 0.79
HDDC3-206ENST00000561036 LMBRD1Q9NUN5 540 aa20.01■□□□□ 0.79
HDDC3-206ENST00000561036 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
HDDC3-206ENST00000561036 TAOK2Q9UL54 1235 aa20.01■□□□□ 0.79
HDDC3-206ENST00000561036 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
HDDC3-206ENST00000561036 PSME4Q14997 1843 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 H3BQV1 296 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 PRDM1O75626 825 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 CALM1P0DP23 149 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 CALM2P0DP24 149 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 CALM3P0DP25 149 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 IFFO2Q5TF58 517 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 C16orf86Q6ZW13 317 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 MICU3Q86XE3 530 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 ZNF654Q8IZM8 581 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 ANKS1AQ92625 1134 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 ZKSCAN3Q9BRR0 538 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 ZSCAN16Q9H4T2 348 aaPredicted RBP20■□□□□ 0.79
HDDC3-206ENST00000561036 MKNK2Q9HBH9 465 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 TCP11L1Q9NUJ3 509 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 STK36Q9NRP7 1315 aa20■□□□□ 0.79
HDDC3-206ENST00000561036 YDJCA8MPS7 323 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 WDHD1O75717 1129 aaPredicted RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 FDPSP14324 419 aaKnown RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 SCNN1DP51172 638 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 CSPP1Q1MSJ5 1256 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 IFIT1BQ5T764 474 aaKnown RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 CDC42EP5Q6NZY7 148 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 CDC37L1Q7L3B6 337 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 CATIPQ7Z7H3 387 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 TTC6Q86TZ1 520 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 LARGE2Q8N3Y3 721 aa19.99■□□□□ 0.79
HDDC3-206ENST00000561036 FAM217BQ9NTX9 383 aaPredicted RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 ORC3Q9UBD5 711 aaPredicted RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 SAP30BPQ9UHR5 308 aaKnown RBP19.99■□□□□ 0.79
HDDC3-206ENST00000561036 TSPY2A6NKD2 308 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 DDAH1O94760 285 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 PLCD1P51178 756 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 EVX2Q03828 476 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 NTRK3Q16288 839 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 RTN1Q16799 776 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 KIAA0825Q8IV33 1275 aa19.98■□□□□ 0.79
HDDC3-206ENST00000561036 ZNF444Q8N0Y2 327 aaPredicted RBP19.98■□□□□ 0.79
HDDC3-206ENST00000561036 BRCA1P38398 1863 aaKnown RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 DTNBO60941 627 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 VIL1P09327 827 aaKnown RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 IFNAR1P17181 557 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 CDC27P30260 824 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 ADD1P35611 737 aaKnown RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 PTGER2P43116 358 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 KLHL40Q2TBA0 621 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 RSBN1LQ6PCB5 846 aaPredicted RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 DGKHQ86XP1 1220 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 FANCBQ8NB91 859 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 DYNLL2Q96FJ2 89 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 ZNF277Q9NRM2 450 aaPredicted RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 RBM28Q9NW13 759 aaKnown RBP19.97■□□□□ 0.79
HDDC3-206ENST00000561036 ZNRF3Q9ULT6 936 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 MYH1P12882 1939 aa19.97■□□□□ 0.79
HDDC3-206ENST00000561036 PRPF40AO75400 957 aaKnown RBP19.96■□□□□ 0.79
HDDC3-206ENST00000561036 CDK8P49336 464 aa19.96■□□□□ 0.79
HDDC3-206ENST00000561036 TFAP4Q01664 338 aa19.96■□□□□ 0.79
HDDC3-206ENST00000561036 RESTQ13127 1097 aa19.96■□□□□ 0.79
HDDC3-206ENST00000561036 FAM47AQ5JRC9 791 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms