RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 RAB11FIP4Q86YS3 637 aa15.08■□□□□ 0
SNX1-211ENST00000560829 AMOTL1Q8IY63 956 aa15.08■□□□□ 0
SNX1-211ENST00000560829 ENAHQ8N8S7 591 aaPredicted RBP15.08■□□□□ 0
SNX1-211ENST00000560829 TGFBRAP1Q8WUH2 860 aa15.08■□□□□ 0
SNX1-211ENST00000560829 FSD2A1L4K1 749 aa15.07■□□□□ 0
SNX1-211ENST00000560829 RANBP6O60518 1105 aaKnown RBP15.07■□□□□ 0
SNX1-211ENST00000560829 PRDM1O75626 825 aa15.07■□□□□ 0
SNX1-211ENST00000560829 IFNAR1P17181 557 aa15.07■□□□□ 0
SNX1-211ENST00000560829 UBE2HP62256 183 aa15.07■□□□□ 0
SNX1-211ENST00000560829 TEX11Q8IYF3 940 aa15.07■□□□□ 0
SNX1-211ENST00000560829 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
SNX1-211ENST00000560829 FBXO18Q8NFZ0 1043 aa15.07■□□□□ 0
SNX1-211ENST00000560829 LAMB1P07942 1786 aa15.07■□□□□ 0
SNX1-211ENST00000560829 CHD4Q14839 1912 aa15.07■□□□□ 0
SNX1-211ENST00000560829 G3V3G9 751 aa15.06■□□□□ 0
SNX1-211ENST00000560829 FIBPO43427 364 aa15.06■□□□□ 0
SNX1-211ENST00000560829 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
SNX1-211ENST00000560829 RXRAP19793 462 aa15.06■□□□□ 0
SNX1-211ENST00000560829 DCAF8Q5TAQ9 597 aa15.06■□□□□ 0
SNX1-211ENST00000560829 STRIP1Q5VSL9 837 aa15.06■□□□□ 0
SNX1-211ENST00000560829 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
SNX1-211ENST00000560829 MYL10Q9BUA6 226 aa15.06■□□□□ 0
SNX1-211ENST00000560829 MRIQ9BWK5 157 aa15.06■□□□□ 0
SNX1-211ENST00000560829 SCAND2PQ9GZW5 306 aaPredicted RBP15.06■□□□□ 0
SNX1-211ENST00000560829 FLT1P17948 1338 aa15.06■□□□□ 0
SNX1-211ENST00000560829 CCDC196A0A1B0GTZ2 297 aa15.06■□□□□ 0
SNX1-211ENST00000560829 GADD45BO75293 160 aaPredicted RBP15.06■□□□□ 0
SNX1-211ENST00000560829 KIAA2012Q0VF49 1180 aa15.06■□□□□ 0
SNX1-211ENST00000560829 ATL3Q6DD88 541 aa15.06■□□□□ 0
SNX1-211ENST00000560829 CAVIN1Q6NZI2 390 aaKnown RBP15.06■□□□□ 0
SNX1-211ENST00000560829 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
SNX1-211ENST00000560829 HHIPL2Q6UWX4 724 aa15.06■□□□□ 0
SNX1-211ENST00000560829 C8orf76Q96K31 380 aa15.06■□□□□ 0
SNX1-211ENST00000560829 SLX4Q8IY92 1834 aa15.05■□□□□ 0
SNX1-211ENST00000560829 IARSP41252 1262 aaKnown RBP15.05■□□□□ -0
SNX1-211ENST00000560829 ZNF445P59923 1031 aa15.05■□□□□ -0
SNX1-211ENST00000560829 RTN1Q16799 776 aa15.05■□□□□ -0
SNX1-211ENST00000560829 IFIT1BQ5T764 474 aaKnown RBP15.05■□□□□ -0
SNX1-211ENST00000560829 MAPKAPK5Q8IW41 473 aa15.05■□□□□ -0
SNX1-211ENST00000560829 FANCBQ8NB91 859 aa15.05■□□□□ -0
SNX1-211ENST00000560829 DBNDD1Q9H9R9 158 aa15.05■□□□□ -0
SNX1-211ENST00000560829 TTF2Q9UNY4 1162 aaKnown RBP15.05■□□□□ -0
SNX1-211ENST00000560829 PPFIA3O75145 1194 aa15.04■□□□□ -0
SNX1-211ENST00000560829 DDAH1O94760 285 aa15.04■□□□□ -0
SNX1-211ENST00000560829 FMNL1O95466 1100 aaPredicted RBP15.04■□□□□ -0
SNX1-211ENST00000560829 CALM1P0DP23 149 aa15.04■□□□□ -0
SNX1-211ENST00000560829 CALM2P0DP24 149 aa15.04■□□□□ -0
SNX1-211ENST00000560829 CALM3P0DP25 149 aa15.04■□□□□ -0
SNX1-211ENST00000560829 DACT2Q5SW24 774 aa15.04■□□□□ -0
SNX1-211ENST00000560829 TTC6Q86TZ1 520 aa15.04■□□□□ -0
SNX1-211ENST00000560829 TTLL6Q8N841 843 aa15.04■□□□□ -0
SNX1-211ENST00000560829 FBXW7Q969H0 707 aa15.04■□□□□ -0
SNX1-211ENST00000560829 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
SNX1-211ENST00000560829 DDX60LQ5H9U9 1706 aaKnown RBP15.04■□□□□ -0
SNX1-211ENST00000560829 ECE2O60344 883 aa15.03■□□□□ -0
SNX1-211ENST00000560829 KCNA3P22001 575 aa15.03■□□□□ -0
SNX1-211ENST00000560829 TROAPQ12815 778 aa15.03■□□□□ -0
SNX1-211ENST00000560829 CCDC144CPQ8IYA2 1237 aa15.03■□□□□ -0
SNX1-211ENST00000560829 ANKS1AQ92625 1134 aa15.03■□□□□ -0
SNX1-211ENST00000560829 ZNF287Q9HBT7 754 aa15.03■□□□□ -0
SNX1-211ENST00000560829 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
SNX1-211ENST00000560829 TMEM63CQ9P1W3 806 aa15.03■□□□□ -0
SNX1-211ENST00000560829 CFAP45Q9UL16 551 aa15.03■□□□□ -0
SNX1-211ENST00000560829 GOLGA6L3A6NEY3 463 aa15.03■□□□□ -0
SNX1-211ENST00000560829 TSPY2A6NKD2 308 aa15.03■□□□□ -0
SNX1-211ENST00000560829 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
SNX1-211ENST00000560829 PLCD1P51178 756 aa15.03■□□□□ -0
SNX1-211ENST00000560829 HDLBPQ00341 1268 aaKnown RBP15.03■□□□□ -0
SNX1-211ENST00000560829 SSRP1Q08945 709 aaKnown RBP15.03■□□□□ -0
SNX1-211ENST00000560829 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
SNX1-211ENST00000560829 CCDC178Q5BJE1 867 aa15.03■□□□□ -0
SNX1-211ENST00000560829 FAM47AQ5JRC9 791 aa15.03■□□□□ -0
SNX1-211ENST00000560829 C16orf86Q6ZW13 317 aa15.03■□□□□ -0
SNX1-211ENST00000560829 CATIPQ7Z7H3 387 aa15.03■□□□□ -0
SNX1-211ENST00000560829 NBPF11Q86T75 865 aa15.03■□□□□ -0
SNX1-211ENST00000560829 DGKHQ86XP1 1220 aa15.03■□□□□ -0
SNX1-211ENST00000560829 LEO1Q8WVC0 666 aaPredicted RBP15.03■□□□□ -0
SNX1-211ENST00000560829 WASF1Q92558 559 aa15.03■□□□□ -0
SNX1-211ENST00000560829 PHKBQ93100 1093 aa15.03■□□□□ -0
SNX1-211ENST00000560829 TEKT1Q969V4 418 aa15.03■□□□□ -0
SNX1-211ENST00000560829 PSMD1Q99460 953 aa15.03■□□□□ -0
SNX1-211ENST00000560829 ALG1Q9BT22 464 aa15.03■□□□□ -0
SNX1-211ENST00000560829 MXD3Q9BW11 206 aa15.03■□□□□ -0
SNX1-211ENST00000560829 DLEC1Q9Y238 1755 aa15.02■□□□□ -0
SNX1-211ENST00000560829 CCDC93Q567U6 631 aa15.02■□□□□ -0
SNX1-211ENST00000560829 ILDR1Q86SU0 546 aaPredicted RBP15.02■□□□□ -0
SNX1-211ENST00000560829 RTKN2Q8IZC4 609 aa15.02■□□□□ -0
SNX1-211ENST00000560829 CRACR2BQ8N4Y2 399 aaPredicted RBP15.02■□□□□ -0
SNX1-211ENST00000560829 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
SNX1-211ENST00000560829 DYNLL2Q96FJ2 89 aa15.02■□□□□ -0
SNX1-211ENST00000560829 RBM28Q9NW13 759 aaKnown RBP15.02■□□□□ -0
SNX1-211ENST00000560829 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
SNX1-211ENST00000560829 MYH2Q9UKX2 1941 aa15.02■□□□□ -0
SNX1-211ENST00000560829 USP17L3A6NCW0 530 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 USP17L4A6NCW7 530 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 F8W031 263 aaPredicted RBP15.01□□□□□ -0.01
SNX1-211ENST00000560829 C21orf2O43822 256 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 FOSBP53539 338 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 TFAP4Q01664 338 aa15.01□□□□□ -0.01
SNX1-211ENST00000560829 GUCY1B3Q02153 619 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms