RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 METTL24Q5JXM2 366 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 TRMT44Q8IYL2 757 aaKnown RBP9.36□□□□□ -0.91
APH1B-209ENST00000560716 C7orf61Q8IZ16 206 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 ANKRD44Q8N8A2 993 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 LPIN2Q92539 896 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 GUCD1Q96NT3 240 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 SRCIN1Q9C0H9 1055 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 PICK1Q9NRD5 415 aa9.36□□□□□ -0.91
APH1B-209ENST00000560716 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
APH1B-209ENST00000560716 PRUNE2Q8WUY3 3088 aa9.35□□□□□ -0.91
APH1B-209ENST00000560716 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
APH1B-209ENST00000560716 DDX10Q13206 875 aaKnown RBP9.35□□□□□ -0.91
APH1B-209ENST00000560716 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
APH1B-209ENST00000560716 ZFPM1Q8IX07 1006 aa9.35□□□□□ -0.91
APH1B-209ENST00000560716 SMCR8Q8TEV9 937 aaPredicted RBP9.35□□□□□ -0.91
APH1B-209ENST00000560716 USP6NLQ92738 828 aa9.35□□□□□ -0.91
APH1B-209ENST00000560716 UBE2OQ9C0C9 1292 aaKnown RBP9.35□□□□□ -0.91
APH1B-209ENST00000560716 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
APH1B-209ENST00000560716 ZMYND8Q9ULU4 1186 aaPredicted RBP9.35□□□□□ -0.91
APH1B-209ENST00000560716 PRDX5P30044 214 aa9.34□□□□□ -0.91
APH1B-209ENST00000560716 HOXA7P31268 230 aaPredicted RBP9.34□□□□□ -0.91
APH1B-209ENST00000560716 RFX5P48382 616 aaPredicted RBP9.34□□□□□ -0.91
APH1B-209ENST00000560716 TCP10Q12799 353 aa9.34□□□□□ -0.91
APH1B-209ENST00000560716 PABPC4Q13310 644 aaKnown RBP eCLIP9.34□□□□□ -0.91
APH1B-209ENST00000560716 LHX8Q68G74 356 aa9.34□□□□□ -0.91
APH1B-209ENST00000560716 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
APH1B-209ENST00000560716 PRDM6Q9NQX0 595 aa9.34□□□□□ -0.91
APH1B-209ENST00000560716 USP40Q9NVE5 1235 aa9.34□□□□□ -0.91
APH1B-209ENST00000560716 EYA2O00167 538 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 LDHBP07195 334 aaKnown RBP9.33□□□□□ -0.92
APH1B-209ENST00000560716 RGS3P49796 1198 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
APH1B-209ENST00000560716 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 TREML2Q5T2D2 321 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 GADL1Q6ZQY3 521 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 ZGPATQ8N5A5 531 aaKnown RBP9.33□□□□□ -0.92
APH1B-209ENST00000560716 ANKRD13CQ8N6S4 541 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 SOCS4Q8WXH5 440 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 TRIB2Q92519 343 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 LRRFIP2Q9Y608 721 aaKnown RBP9.33□□□□□ -0.92
APH1B-209ENST00000560716 ZNF236Q9UL36 1845 aa9.33□□□□□ -0.92
APH1B-209ENST00000560716 DDTLA6NHG4 134 aaPredicted RBP9.32□□□□□ -0.92
APH1B-209ENST00000560716 CIAO1O76071 339 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 IGHA2P01877 340 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 SLC5A1P13866 664 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 TRIM32Q13049 653 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 ATG9AQ7Z3C6 839 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 WDR18Q9BV38 432 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 TAOK2Q9UL54 1235 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 MUC3AQ02505 3323 aa9.32□□□□□ -0.92
APH1B-209ENST00000560716 TMEM265A0A087WTH1 108 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 GPR75-ASB3A0A0A6YYF3 556 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 SYN1P17600 705 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 RHBDL3P58872 404 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 LRRC26Q2I0M4 334 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 METTL16Q86W50 562 aaKnown RBP9.31□□□□□ -0.92
APH1B-209ENST00000560716 SLF2Q8IX21 1173 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 USP44Q9H0E7 712 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 ASCC2Q9H1I8 757 aaPredicted RBP9.31□□□□□ -0.92
APH1B-209ENST00000560716 DDX4Q9NQI0 724 aaKnown RBP9.31□□□□□ -0.92
APH1B-209ENST00000560716 GINM1Q9NU53 330 aa9.31□□□□□ -0.92
APH1B-209ENST00000560716 GNL3LQ9NVN8 582 aaKnown RBP9.31□□□□□ -0.92
APH1B-209ENST00000560716 TRIM75PA6NK02 468 aa9.3□□□□□ -0.92
APH1B-209ENST00000560716 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
APH1B-209ENST00000560716 CAP2P40123 477 aa9.3□□□□□ -0.92
APH1B-209ENST00000560716 MORN1Q5T089 497 aa9.3□□□□□ -0.92
APH1B-209ENST00000560716 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
APH1B-209ENST00000560716 SYMPKQ92797 1274 aaKnown RBP9.3□□□□□ -0.92
APH1B-209ENST00000560716 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
APH1B-209ENST00000560716 PTPRCP08575 1304 aa9.3□□□□□ -0.92
APH1B-209ENST00000560716 USP17L5A8MUK1 530 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 IGSF3O75054 1194 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 HOXC6P09630 235 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 MAPK4P31152 587 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 ZEB1P37275 1124 aaPredicted RBP9.29□□□□□ -0.92
APH1B-209ENST00000560716 SMAD3P84022 425 aaKnown RBP9.29□□□□□ -0.92
APH1B-209ENST00000560716 CACNB2Q08289 660 aaPredicted RBP9.29□□□□□ -0.92
APH1B-209ENST00000560716 SPP2Q13103 211 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 SNX17Q15036 470 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 KLHDC4Q8TBB5 520 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 HERC5Q9UII4 1024 aaKnown RBP9.29□□□□□ -0.92
APH1B-209ENST00000560716 MROH7-TTC4A0A0A0MT08 1334 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
APH1B-209ENST00000560716 C19orf81C9J6K1 198 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 MSCO60682 206 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 BACE1P56817 501 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 ATP2B3Q16720 1220 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 C1orf53Q5VUE5 145 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 SPTY2D1Q68D10 685 aaPredicted RBP9.28□□□□□ -0.92
APH1B-209ENST00000560716 SLC4A10Q6U841 1118 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 GPRC5AQ8NFJ5 357 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 ZNF384Q8TF68 577 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 CDX2Q99626 313 aaPredicted RBP9.28□□□□□ -0.92
APH1B-209ENST00000560716 SEMA6BQ9H3T3 888 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 AS3MTQ9HBK9 375 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 RBPJLQ9UBG7 517 aa9.28□□□□□ -0.92
APH1B-209ENST00000560716 ZNFX1Q9P2E3 1918 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms