RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GPR25O00155 361 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 TBC1D12O60347 775 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 PTPRAP18433 802 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 MAP3K10Q02779 954 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 TAF1CQ15572 869 aaPredicted RBP15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 ZSCAN25Q6NSZ9 544 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 GCC1Q96CN9 775 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 CRNKL1Q9BZJ0 848 aaKnown RBP15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 R3HDMLQ9H3Y0 253 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 RWDD1Q9H446 243 aaPredicted RBP15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 FOCADQ5VW36 1801 aa15.68■□□□□ 0.1
CTDSPL2-209ENST00000560620 LAMB1P07942 1786 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 ERC2O15083 957 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 FKTNO75072 461 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 ADD2P35612 726 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 CRHR2Q13324 411 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 MCOLN1Q9GZU1 580 aa15.67■□□□□ 0.1
CTDSPL2-209ENST00000560620 DOCK1Q14185 1865 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 TRIM75PA6NK02 468 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 BTBD19C9JJ37 291 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 POLR3DP05423 398 aaPredicted RBP15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 IRX6P78412 446 aaPredicted RBP15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 SLFNL1Q499Z3 407 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 TTC6Q86TZ1 520 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 FOXP4Q8IVH2 680 aaPredicted RBP15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 RIOK1Q9BRS2 568 aaKnown RBP15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 CFHR5Q9BXR6 569 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 ARMT1Q9H993 441 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 MYH1P12882 1939 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
CTDSPL2-209ENST00000560620 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 MBD4O95243 580 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 MX1P20591 662 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 GADL1Q6ZQY3 521 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 CTU1Q7Z7A3 348 aaKnown RBP15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 CCDC84Q86UT8 332 aaPredicted RBP15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 LCORLQ8N3X6 602 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 OTUD7AQ8TE49 926 aaPredicted RBP15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 MCM9Q9NXL9 1143 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 KCNH4Q9UQ05 1017 aa15.65■□□□□ 0.1
CTDSPL2-209ENST00000560620 CXCL11O14625 94 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 CAP2P40123 477 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 B4GALNT3Q6L9W6 998 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 SDR42E1Q8WUS8 393 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 DDRGK1Q96HY6 314 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 ABHD8Q96I13 439 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 MYH7P12883 1935 aa15.64■□□□□ 0.09
CTDSPL2-209ENST00000560620 PDHXO00330 501 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 GLRX3O76003 335 aaKnown RBP15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 GDF11O95390 407 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 CHGBP05060 677 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 UBE3CQ15386 1083 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 LRRFIP1Q32MZ4 808 aaKnown RBP15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 NOM1Q5C9Z4 860 aaKnown RBP15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 FASTKD5Q7L8L6 764 aaKnown RBP15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 AS3MTQ9HBK9 375 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 SERPINB13Q9UIV8 391 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 AFG3L2Q9Y4W6 797 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 ATAD5Q96QE3 1844 aa15.63■□□□□ 0.09
CTDSPL2-209ENST00000560620 CCDC85CA6NKD9 419 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 USP17L5A8MUK1 530 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 ASNSP08243 561 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 SP3Q02447 781 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 SPP2Q13103 211 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 ANKRD23Q86SG2 305 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 AMOTL1Q8IY63 956 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 FSD1Q9BTV5 496 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 LNPKQ9C0E8 428 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 DNAJC18Q9H819 358 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 ZCCHC17Q9NP64 241 aaKnown RBP15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 NAV1Q8NEY1 1877 aa15.62■□□□□ 0.09
CTDSPL2-209ENST00000560620 SIPA1L1O43166 1804 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 A0A0G2JLL6 359 aaPredicted RBP15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 PRKAB2O43741 272 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 ZFYP08048 801 aaPredicted RBP15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 PLCD1P51178 756 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 RRP1BQ14684 758 aaKnown RBP15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 PRRT2Q7Z6L0 340 aaPredicted RBP15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 ZNF280CQ8ND82 737 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 PI4K2BQ8TCG2 481 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 CD99L2Q8TCZ2 262 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 PUS7LQ9H0K6 701 aaKnown RBP15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 DCP1AQ9NPI6 582 aaPredicted RBP15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 SLC4A4Q9Y6R1 1079 aa15.61■□□□□ 0.09
CTDSPL2-209ENST00000560620 RNF113AO15541 343 aaKnown RBP15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 TLR2O60603 784 aa15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 ECM2O94769 699 aaPredicted RBP15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 IGHDP01880 384 aa15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 KIF22Q14807 665 aa15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 PKN2Q16513 984 aaKnown RBP15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 METTL16Q86W50 562 aaKnown RBP15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 PARK7Q99497 189 aaKnown RBP15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 TBC1D2Q9BYX2 928 aa15.6■□□□□ 0.09
CTDSPL2-209ENST00000560620 EHD4Q9H223 541 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms