RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 KCNG4Q8TDN1 519 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 UBXN4Q92575 508 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 ZNF592Q92610 1267 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 GTF3C6Q969F1 213 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 CCDC34Q96HJ3 373 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 RTFDC1Q9BY42 306 aaPredicted RBP9.86□□□□□ -0.83
CCDC33-209ENST00000560565 ACBD3Q9H3P7 528 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 SEC31BQ9NQW1 1179 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 RCOR1Q9UKL0 485 aa9.86□□□□□ -0.83
CCDC33-209ENST00000560565 LRRC37AA6NMS7 1700 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 EFCAB8A8MWE9 144 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 POTECB2RU33 542 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 IKBKBO14920 756 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 AOC3Q16853 763 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 MUM1L1Q5H9M0 696 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 TSHZ3Q63HK5 1081 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 ANKRD18AQ8IVF6 992 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 NIM1KQ8IY84 436 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 C17orf53Q8N3J3 647 aaPredicted RBP9.85□□□□□ -0.83
CCDC33-209ENST00000560565 MSL3Q8N5Y2 521 aaKnown RBP9.85□□□□□ -0.83
CCDC33-209ENST00000560565 CACTINQ8WUQ7 758 aaKnown RBP9.85□□□□□ -0.83
CCDC33-209ENST00000560565 MPHOSPH8Q99549 860 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 FSD1Q9BTV5 496 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 CNNM1Q9NRU3 951 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 DNAI1Q9UI46 699 aa9.85□□□□□ -0.83
CCDC33-209ENST00000560565 ZNF541Q9H0D2 1346 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 EIF3JO75822 258 aaKnown RBP9.84□□□□□ -0.83
CCDC33-209ENST00000560565 IVLP07476 585 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 H2AFXP16104 143 aaPredicted RBP9.84□□□□□ -0.83
CCDC33-209ENST00000560565 LIG1P18858 919 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 LBX1P52954 281 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 GPSM2P81274 684 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 RESTQ13127 1097 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 IQCB1Q15051 598 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 CAMK4Q16566 473 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 WASHC4Q2M389 1173 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 LRRC24Q50LG9 513 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 METTL24Q5JXM2 366 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 CCDC158Q5M9N0 1113 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 CDC37L1Q7L3B6 337 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 BRAPQ7Z569 592 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 CKAP2LQ8IYA6 745 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 GPC2Q8N158 579 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 MRPS27Q92552 414 aaKnown RBP9.84□□□□□ -0.83
CCDC33-209ENST00000560565 ZNF594Q96JF6 807 aaPredicted RBP9.84□□□□□ -0.83
CCDC33-209ENST00000560565 ZNF512BQ96KM6 892 aaPredicted RBP9.84□□□□□ -0.83
CCDC33-209ENST00000560565 NEK1Q96PY6 1258 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 DACH1Q9UI36 760 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 DBNLQ9UJU6 430 aaKnown RBP9.84□□□□□ -0.83
CCDC33-209ENST00000560565 TPCN1Q9ULQ1 816 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 ZNRF3Q9ULT6 936 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 GJA3Q9Y6H8 435 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 SCN4AP35499 1836 aa9.84□□□□□ -0.83
CCDC33-209ENST00000560565 A0A1B0GUL7 405 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 ZBTB22O15209 634 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 AP5Z1O43299 807 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 PDE8BO95263 885 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 YEATS4O95619 227 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 CYP2C19P33261 490 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 HOMER1Q86YM7 354 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 VGLL2Q8N8G2 317 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 CHAMP1Q96JM3 812 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
CCDC33-209ENST00000560565 PUS3Q9BZE2 481 aaKnown RBP9.83□□□□□ -0.84
CCDC33-209ENST00000560565 GBP3Q9H0R5 595 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 CCDC8Q9H0W5 538 aaPredicted RBP9.83□□□□□ -0.84
CCDC33-209ENST00000560565 BSDC1Q9NW68 430 aaPredicted RBP9.83□□□□□ -0.84
CCDC33-209ENST00000560565 PSD3Q9NYI0 1048 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 ZNF215Q9UL58 517 aaPredicted RBP9.83□□□□□ -0.84
CCDC33-209ENST00000560565 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.83□□□□□ -0.84
CCDC33-209ENST00000560565 MED23Q9ULK4 1368 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 CUL9Q8IWT3 2517 aa9.83□□□□□ -0.84
CCDC33-209ENST00000560565 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 PFKFB2O60825 505 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 NR1I2O75469 434 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 ERLIN1O75477 346 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 ETF1P62495 437 aaKnown RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 PUM3Q15397 648 aaKnown RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 SF3A1Q15459 793 aaKnown RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 CT47A1Q5JQC4 288 aaPredicted RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 ADALQ6DHV7 355 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 ELOA2Q8IYF1 753 aaPredicted RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 FBXL16Q8N461 479 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 GPR161Q8N6U8 529 aaKnown RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 SMARCC2Q8TAQ2 1214 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 TBC1D16Q8TBP0 767 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 BBXQ8WY36 941 aaPredicted RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 LPIN2Q92539 896 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 TSC1Q92574 1164 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 ERCC4Q92889 916 aaPredicted RBP9.82□□□□□ -0.84
CCDC33-209ENST00000560565 EYA3Q99504 573 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 HAUS7Q99871 368 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 DBNDD2Q9BQY9 259 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 SDF4Q9BRK5 362 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms