RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MOB2Q70IA6 237 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 MIGA2Q7L4E1 593 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 RASAL3Q86YV0 1011 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 TBC1D2Q9BYX2 928 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 ARPP21Q9UBL0 812 aaPredicted RBP16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 SERPINB13Q9UIV8 391 aa16.77■□□□□ 0.27
PKNOX1-209ENST00000560448 INHBEP58166 350 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 VGLL4Q14135 290 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 MCMDC2Q4G0Z9 681 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 ERO1BQ86YB8 467 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 CRACR2BQ8N4Y2 399 aaPredicted RBP16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 SLC4A4Q9Y6R1 1079 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 OTOFQ9HC10 1997 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 LAMB1P07942 1786 aa16.76■□□□□ 0.27
PKNOX1-209ENST00000560448 SPDYE5A6NIY4 337 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 PHF20L1A8MW92 1017 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 PATL2C9JE40 543 aaKnown RBP16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 SDSP20132 328 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 SPRYD7Q5W111 196 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 SCYL3Q8IZE3 742 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 SDR42E1Q8WUS8 393 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 SWAP70Q9UH65 585 aa16.75■□□□□ 0.27
PKNOX1-209ENST00000560448 MANSC4A6NHS7 340 aaPredicted RBP16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 CA12O43570 354 aa16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 PPATQ06203 517 aa16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 SKAP1Q86WV1 359 aa16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
PKNOX1-209ENST00000560448 GSPT1P15170 499 aaKnown RBP16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 SLFNL1Q499Z3 407 aa16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 WNK4Q96J92 1243 aa16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 PICK1Q9NRD5 415 aa16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 FZD1Q9UP38 647 aa16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 RAD50Q92878 1312 aa16.73■□□□□ 0.27
PKNOX1-209ENST00000560448 GSG1L2A8MUP6 293 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 M0R2C6 588 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 CHGBP05060 677 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 ASNSP08243 561 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 BMP2KLQ5H9B9 411 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 OPTNQ96CV9 577 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 BEGAINQ9BUH8 593 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 SAP30BPQ9UHR5 308 aaKnown RBP16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 SIPA1L1O43166 1804 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
PKNOX1-209ENST00000560448 INPP5BP32019 993 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 CAP2P40123 477 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 GABPAQ06546 454 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 GRM1Q13255 1194 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 PPIL2Q13356 520 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 ZKSCAN4Q969J2 545 aaPredicted RBP16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 CLMNQ96JQ2 1002 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 ELP3Q9H9T3 547 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 DOCK1Q14185 1865 aa16.71■□□□□ 0.27
PKNOX1-209ENST00000560448 PRKAB2O43741 272 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 ALDH1A1P00352 501 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 APPP05067 770 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 TM4SF4P48230 202 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 TDO2P48775 406 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 GTF2A2P52657 109 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 IFNL3Q8IZI9 196 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 NAPBQ9H115 298 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 USP17L21D6R901 530 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 CXCL11O14625 94 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 NT5C2P49902 561 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 PLCD1P51178 756 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 KIF23Q02241 960 aaPredicted RBP16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 ALX1Q15699 326 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 SEC62Q99442 399 aaKnown RBP16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 DNAJC18Q9H819 358 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 ZCCHC17Q9NP64 241 aaKnown RBP16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 WBP1LQ9NX94 342 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 SAGE1Q9NXZ1 904 aa16.7■□□□□ 0.26
PKNOX1-209ENST00000560448 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 PTPRAP18433 802 aa16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 SNAPC2Q13487 334 aa16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 KCNH4Q9UQ05 1017 aa16.69■□□□□ 0.26
PKNOX1-209ENST00000560448 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms