RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 C1QTNF9P0C862 333 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 NME2P22392 152 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 NTF4P34130 210 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 ZNF252P-AS1Q0IIN9 211 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 MAP1SQ66K74 1059 aaPredicted RBP6.11□□□□□ -1.43
SPG11-222ENST00000560435 TTLL10Q6ZVT0 673 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 FBXO15Q8NCQ5 510 aaPredicted RBP6.11□□□□□ -1.43
SPG11-222ENST00000560435 EPS8L3Q8TE67 593 aaKnown RBP6.11□□□□□ -1.43
SPG11-222ENST00000560435 NIF3L1Q9GZT8 377 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 PPP4R2Q9NY27 417 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 MAPK8IP1Q9UQF2 711 aa6.11□□□□□ -1.43
SPG11-222ENST00000560435 ARID3CA6NKF2 412 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 B8ZZF3 427 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 NFIBO00712 420 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 EOMESO95936 686 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 GDNFP39905 211 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 SERPINB4P48594 390 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 PPM1JQ5JR12 505 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 B4GALNT3Q6L9W6 998 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 ACSBG1Q96GR2 724 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 CSRNP1Q96S65 589 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 FOXQ1Q9C009 403 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 CARS2Q9HA77 564 aaKnown RBP6.1□□□□□ -1.43
SPG11-222ENST00000560435 PRDM5Q9NQX1 630 aaPredicted RBP6.1□□□□□ -1.43
SPG11-222ENST00000560435 C19orf73Q9NVV2 129 aa6.1□□□□□ -1.43
SPG11-222ENST00000560435 UBE3DQ7Z6J8 389 aa6.09□□□□□ -1.43
SPG11-222ENST00000560435 AMIGO3Q86WK7 504 aa6.09□□□□□ -1.43
SPG11-222ENST00000560435 ALKBH8Q96BT7 664 aaKnown RBP6.09□□□□□ -1.43
SPG11-222ENST00000560435 SEMA3GQ9NS98 782 aa6.09□□□□□ -1.43
SPG11-222ENST00000560435 FANCGO15287 622 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 RING1Q06587 406 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 C22orf34Q6ZV56 151 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 NPAS4Q8IUM7 802 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 CCDC82Q8N4S0 544 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 DMRTB1Q96MA1 342 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 CSADQ9Y600 493 aa6.08□□□□□ -1.44
SPG11-222ENST00000560435 ZBTB37Q5TC79 503 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 ARMCX6Q7L4S7 300 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 KCT2Q8NC54 265 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 TMC1Q8TDI8 760 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 CCDC120Q96HB5 630 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 HSPA12BQ96MM6 686 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 BCO2Q9BYV7 579 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 NSUN3Q9H649 340 aaKnown RBP6.07□□□□□ -1.44
SPG11-222ENST00000560435 CBX8Q9HC52 389 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 ATP13A1Q9HD20 1204 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 PICK1Q9NRD5 415 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 NLRP2Q9NX02 1062 aa6.07□□□□□ -1.44
SPG11-222ENST00000560435 DCDC2CA8MYV0 355 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 NPIPB6E9PJ23 425 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 LRIG2O94898 1065 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 TRIM37O94972 964 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 CDC37L1Q7L3B6 337 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 DIRC2Q96SL1 478 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 CD320Q9NPF0 282 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 AKAP2Q9Y2D5 859 aa6.06□□□□□ -1.44
SPG11-222ENST00000560435 FAM155AB1AL88 458 aaPredicted RBP6.05□□□□□ -1.44
SPG11-222ENST00000560435 TMEM253P0C7T8 217 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 MED14OSP0DP75 135 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 BUD31P41223 144 aaPredicted RBP6.05□□□□□ -1.44
SPG11-222ENST00000560435 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 MPRIPQ6WCQ1 1025 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 C12orf40Q86WS4 652 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 MFSD4AQ8N468 514 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 NECAB3Q96P71 396 aaPredicted RBP6.05□□□□□ -1.44
SPG11-222ENST00000560435 RBCK1Q9BYM8 510 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 USTQ9Y2C2 406 aa6.05□□□□□ -1.44
SPG11-222ENST00000560435 PRR33A8MZF0 331 aa6.04□□□□□ -1.44
SPG11-222ENST00000560435 SLITRK5O94991 958 aa6.04□□□□□ -1.44
SPG11-222ENST00000560435 KCNA10Q16322 511 aa6.04□□□□□ -1.44
SPG11-222ENST00000560435 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
SPG11-222ENST00000560435 EPB41L4BQ9H329 900 aa6.04□□□□□ -1.44
SPG11-222ENST00000560435 SAMM50Q9Y512 469 aa6.04□□□□□ -1.44
SPG11-222ENST00000560435 H3BS24 57 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 INHBBP09529 407 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 BMP6P22004 513 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 CDKAL1Q5VV42 579 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 SCARA3Q6AZY7 606 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 CIAPIN1Q6FI81 312 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 THAP5Q7Z6K1 395 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 C3orf58Q8NDZ4 430 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 ZNF507Q8TCN5 953 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 GRIN3AQ8TCU5 1115 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 ALPK1Q96QP1 1244 aa6.03□□□□□ -1.44
SPG11-222ENST00000560435 DCP1AQ9NPI6 582 aaPredicted RBP6.03□□□□□ -1.44
SPG11-222ENST00000560435 TCAF2A6NFQ2 919 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 RAC2P15153 192 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 GLDCP23378 1020 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 NXPE4Q6UWF7 544 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 ATG14Q6ZNE5 492 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 CEP44Q9C0F1 390 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 TPX2Q9ULW0 747 aaKnown RBP6.02□□□□□ -1.45
SPG11-222ENST00000560435 ST14Q9Y5Y6 855 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 CAPN6Q9Y6Q1 641 aa6.02□□□□□ -1.45
SPG11-222ENST00000560435 ENC1O14682 589 aa6.01□□□□□ -1.45
SPG11-222ENST00000560435 CAP2P40123 477 aa6.01□□□□□ -1.45
SPG11-222ENST00000560435 FGD1P98174 961 aa6.01□□□□□ -1.45
SPG11-222ENST00000560435 LLGL2Q6P1M3 1020 aa6.01□□□□□ -1.45
SPG11-222ENST00000560435 ABHD4Q8TB40 342 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms