RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 PI16Q6UXB8 463 aa8.07□□□□□ -1.12
USP8-210ENST00000560379 TREML1Q86YW5 311 aa8.07□□□□□ -1.12
USP8-210ENST00000560379 CKAP2LQ8IYA6 745 aa8.07□□□□□ -1.12
USP8-210ENST00000560379 KCNB2Q92953 911 aa8.07□□□□□ -1.12
USP8-210ENST00000560379 STRCQ7RTU9 1775 aa8.07□□□□□ -1.12
USP8-210ENST00000560379 NEURL4Q96JN8 1562 aa8.06□□□□□ -1.12
USP8-210ENST00000560379 PTPRTO14522 1441 aa8.06□□□□□ -1.12
USP8-210ENST00000560379 CFAP65Q6ZU64 1925 aaKnown RBP8.06□□□□□ -1.12
USP8-210ENST00000560379 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
USP8-210ENST00000560379 CENPBP07199 599 aaPredicted RBP8.06□□□□□ -1.12
USP8-210ENST00000560379 HSD3B2P26439 372 aa8.06□□□□□ -1.12
USP8-210ENST00000560379 CCDC181Q5TID7 509 aa8.06□□□□□ -1.12
USP8-210ENST00000560379 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
USP8-210ENST00000560379 TP53INP1Q96A56 240 aa8.06□□□□□ -1.12
USP8-210ENST00000560379 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
USP8-210ENST00000560379 SLIT1O75093 1534 aa8.06□□□□□ -1.12
USP8-210ENST00000560379 TMEM131LA2VDJ0 1609 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 PTMSP20962 102 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 CEBPAP49715 358 aaPredicted RBP8.05□□□□□ -1.12
USP8-210ENST00000560379 ST13P50502 369 aaKnown RBP8.05□□□□□ -1.12
USP8-210ENST00000560379 RAC1P63000 192 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 USPL1Q5W0Q7 1092 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 SPTY2D1Q68D10 685 aaPredicted RBP8.05□□□□□ -1.12
USP8-210ENST00000560379 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 DMRTC2Q8IXT2 367 aaPredicted RBP8.05□□□□□ -1.12
USP8-210ENST00000560379 CCDC74AQ96AQ1 378 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 METTL14Q9HCE5 456 aaKnown RBP8.05□□□□□ -1.12
USP8-210ENST00000560379 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 RAB3GAP2Q9H2M9 1393 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 KIF1BO60333 1816 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 ARHGAP23Q9P227 1491 aa8.05□□□□□ -1.12
USP8-210ENST00000560379 CLTCL1P53675 1640 aa8.04□□□□□ -1.12
USP8-210ENST00000560379 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
USP8-210ENST00000560379 USP17L7P0C7H9 530 aa8.04□□□□□ -1.12
USP8-210ENST00000560379 XRCC5P13010 732 aaKnown RBP8.04□□□□□ -1.12
USP8-210ENST00000560379 NFKB1P19838 968 aa8.04□□□□□ -1.12
USP8-210ENST00000560379 IBSPP21815 317 aaPredicted RBP8.04□□□□□ -1.12
USP8-210ENST00000560379 PRDM10Q9NQV6 1147 aa8.04□□□□□ -1.12
USP8-210ENST00000560379 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
USP8-210ENST00000560379 FAM8A1Q9UBU6 413 aa8.04□□□□□ -1.12
USP8-210ENST00000560379 MYO5BQ9ULV0 1848 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 IQGAP1P46940 1657 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 ZBTB42B2RXF5 422 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 SERINC3Q13530 473 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 RNF187Q5TA31 235 aaPredicted RBP8.03□□□□□ -1.12
USP8-210ENST00000560379 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 IER5Q5VY09 327 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 RASGRP4Q8TDF6 673 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 MORC4Q8TE76 937 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 LPIN3Q9BQK8 851 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 ZFATQ9P243 1243 aa8.03□□□□□ -1.12
USP8-210ENST00000560379 MED14O60244 1454 aa8.02□□□□□ -1.13
USP8-210ENST00000560379 SSBP05455 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP8-210ENST00000560379 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
USP8-210ENST00000560379 BRINP2Q9C0B6 783 aa8.02□□□□□ -1.13
USP8-210ENST00000560379 FOXD3Q9UJU5 478 aaPredicted RBP8.02□□□□□ -1.13
USP8-210ENST00000560379 NOP58Q9Y2X3 529 aaKnown RBP8.02□□□□□ -1.13
USP8-210ENST00000560379 SCAF11Q99590 1463 aaKnown RBP8.01□□□□□ -1.13
USP8-210ENST00000560379 TGFBR3LH3BV60 316 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 TNFRSF21O75509 655 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 NOS3P29474 1203 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 CCINQ13939 588 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 MSL1Q68DK7 614 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 MKL1Q969V6 931 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 SEC16BQ96JE7 1060 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 EFCC1Q9HA90 598 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 KBTBD4Q9NVX7 518 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 MAGEC2Q9UBF1 373 aaPredicted RBP8.01□□□□□ -1.13
USP8-210ENST00000560379 USP21Q9UK80 565 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 DIP2AQ14689 1571 aa8.01□□□□□ -1.13
USP8-210ENST00000560379 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
USP8-210ENST00000560379 MICAL2O94851 1124 aa8□□□□□ -1.13
USP8-210ENST00000560379 ZEB1P37275 1124 aaPredicted RBP8□□□□□ -1.13
USP8-210ENST00000560379 PERM1Q5SV97 790 aa8□□□□□ -1.13
USP8-210ENST00000560379 NXPE4Q6UWF7 544 aa8□□□□□ -1.13
USP8-210ENST00000560379 ZCRB1Q8TBF4 217 aaKnown RBP8□□□□□ -1.13
USP8-210ENST00000560379 WFDC12Q8WWY7 111 aa8□□□□□ -1.13
USP8-210ENST00000560379 MEGF10Q96KG7 1140 aa8□□□□□ -1.13
USP8-210ENST00000560379 SPON2Q9BUD6 331 aa8□□□□□ -1.13
USP8-210ENST00000560379 KRTAP9-9Q9BYP9 154 aa8□□□□□ -1.13
USP8-210ENST00000560379 KRTAP9-4Q9BYQ2 154 aa8□□□□□ -1.13
USP8-210ENST00000560379 IFT172Q9UG01 1749 aa8□□□□□ -1.13
USP8-210ENST00000560379 TMEM2Q9UHN6 1383 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 CCDC144AA2RUR9 1427 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 ENPP3O14638 875 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 DEAF1O75398 565 aaPredicted RBP7.99□□□□□ -1.13
USP8-210ENST00000560379 ZFYVE9O95405 1425 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 CPB1P15086 417 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 INPP5BP32019 993 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 FAM35AQ86V20 835 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 FBXO11Q86XK2 927 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 SGSM3Q96HU1 749 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 SRCIN1Q9C0H9 1055 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 ZFYVE28Q9HCC9 887 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 KLHL42Q9P2K6 505 aa7.99□□□□□ -1.13
USP8-210ENST00000560379 LAS1LQ9Y4W2 734 aaKnown RBP7.99□□□□□ -1.13
USP8-210ENST00000560379 PPLO60437 1756 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms