RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CTAGE15A4D2H0 777 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 TRIM37O94972 964 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 CTAGE8P0CG41 777 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 CTAGE6Q86UF2 777 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 CTAGE4Q8IX94 777 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 CHD1O14646 1710 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 ZNF772Q68DY9 489 aaPredicted RBP15.08■□□□□ 0
TRAF3-208ENST00000560371 GOLGA1Q92805 767 aa15.08■□□□□ 0
TRAF3-208ENST00000560371 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 REXO1Q8N1G1 1221 aaKnown RBP15.07■□□□□ 0
TRAF3-208ENST00000560371 PHKBQ93100 1093 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 IFNKQ9P0W0 207 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
TRAF3-208ENST00000560371 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
TRAF3-208ENST00000560371 ARFGAP3Q9NP61 516 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 RXRBP28702 533 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 NLRX1Q86UT6 975 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 NDC80O14777 642 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 ARID4AP29374 1257 aaPredicted RBP15.07■□□□□ 0
TRAF3-208ENST00000560371 GUCA1BQ9UMX6 200 aa15.07■□□□□ 0
TRAF3-208ENST00000560371 CALUO43852 315 aaPredicted RBP15.06■□□□□ 0
TRAF3-208ENST00000560371 ANO1Q5XXA6 986 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 HACE1Q8IYU2 909 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 RNF34Q969K3 372 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 NOC4LQ9BVI4 516 aaKnown RBP15.06■□□□□ 0
TRAF3-208ENST00000560371 NACA2Q9H009 215 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 ARPP21Q9UBL0 812 aaPredicted RBP15.06■□□□□ 0
TRAF3-208ENST00000560371 TBC1D8BQ0IIM8 1120 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 TTC38Q5R3I4 469 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 AGTPBP1Q9UPW5 1226 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 TMEM94Q12767 1356 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 CCDC63Q8NA47 563 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 ADGRL2O95490 1459 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 CETN3O15182 167 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 DOK7Q18PE1 504 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 PAGR1Q9BTK6 254 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.06■□□□□ 0
TRAF3-208ENST00000560371 MAPK8IP1Q9UQF2 711 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 CBX1P83916 185 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 PTPRTO14522 1441 aa15.06■□□□□ 0
TRAF3-208ENST00000560371 USP17L12C9JPN9 530 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 USP17L21D6R901 530 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 KRT9P35527 623 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 NONOQ15233 471 aaKnown RBP eCLIP15.05■□□□□ 03e-6■■■■□ 20.4
TRAF3-208ENST00000560371 TTLL7Q6ZT98 887 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 CNGA4Q8IV77 575 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 DIS3L2Q8IYB7 885 aaKnown RBP15.05■□□□□ 0
TRAF3-208ENST00000560371 RAB3IL1Q8TBN0 382 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 SNX29Q8TEQ0 813 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 MTUS1Q9ULD2 1270 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 SNX16P57768 344 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 HERC4Q5GLZ8 1057 aaPredicted RBP15.05■□□□□ 0
TRAF3-208ENST00000560371 SPOUT1Q5T280 376 aaKnown RBP15.05■□□□□ 0
TRAF3-208ENST00000560371 ZNF830Q96NB3 372 aaPredicted RBP15.05■□□□□ 0
TRAF3-208ENST00000560371 KCNH3Q9ULD8 1083 aa15.05■□□□□ 0
TRAF3-208ENST00000560371 SGSM2O43147 1006 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 KIAA1524Q8TCG1 905 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 GLG1Q92896 1179 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 FAM107BQ9H098 131 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 OTUD7AQ8TE49 926 aaPredicted RBP15.05■□□□□ -0
TRAF3-208ENST00000560371 CARD10Q9BWT7 1032 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 JAKMIP2Q96AA8 810 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 KIAA0232Q92628 1395 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 ATP2A2P16615 1042 aaKnown RBP15.05■□□□□ -0
TRAF3-208ENST00000560371 GYG1P46976 350 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 TERF1P54274 439 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 MYL5Q02045 173 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 PABPC4Q13310 644 aaKnown RBP eCLIP15.05■□□□□ -0
TRAF3-208ENST00000560371 GIMAP7Q8NHV1 300 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 MYL10Q9BUA6 226 aa15.05■□□□□ -0
TRAF3-208ENST00000560371 MYCT1Q8N699 235 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 CTNND2Q9UQB3 1225 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 GCNT3O95395 438 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 KIF22Q14807 665 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 PROCA1Q8NCQ7 364 aaPredicted RBP15.04■□□□□ -0
TRAF3-208ENST00000560371 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
TRAF3-208ENST00000560371 UIMC1Q96RL1 719 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 PPP1R9BQ96SB3 815 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 TSGA10Q9BZW7 698 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 UGGT1Q9NYU2 1555 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 SCNN1DP51172 638 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 PPP1R7Q15435 360 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 GNPTABQ3T906 1256 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 CCDC114Q96M63 670 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 MRPL44Q9H9J2 332 aaKnown RBP15.04■□□□□ -0
TRAF3-208ENST00000560371 FAM169AQ9Y6X4 670 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 FAM47AQ5JRC9 791 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 C6orf163Q5TEZ5 329 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 ATP5JP18859 108 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 RFX1P22670 979 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 FAM160A1Q05DH4 1040 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 CERKLQ49MI3 558 aaPredicted RBP15.04■□□□□ -0
TRAF3-208ENST00000560371 GADL1Q6ZQY3 521 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 NOX5Q96PH1 765 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 VWA3BQ502W6 1294 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 OTUD6AQ7L8S5 288 aa15.04■□□□□ -0
TRAF3-208ENST00000560371 LZTFL1Q9NQ48 299 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms