RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 DRC1Q96MC2 740 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 SH2B1Q9NRF2 756 aaPredicted RBP6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 STIM2Q9P246 746 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 NPATQ14207 1427 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 MYH15Q9Y2K3 1946 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 TTC21BQ7Z4L5 1316 aa6.99□□□□□ -1.29
SNRPA1-209ENST00000560307 WASLO00401 505 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 FYB1O15117 783 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 TREHO43280 583 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 AP5Z1O43299 807 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 SLU7O95391 586 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 GNRH1P01148 92 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 PTGS1P23219 599 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 CHMLP26374 656 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 COL8A1P27658 744 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 PRKAR2BP31323 418 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 CCT4P50991 539 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 ZNF75DP51815 510 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 EPHA4P54764 986 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 ATP2B2Q01814 1243 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 NAALADL2Q58DX5 795 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 PPP1R26Q5T8A7 1209 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 ZSCAN25Q6NSZ9 544 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 FOXR1Q6PIV2 292 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 C17orf53Q8N3J3 647 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 SREK1Q8WXA9 508 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 RTF1Q92541 710 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 MRFAP1L1Q96HT8 127 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 TTC14Q96N46 770 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 NUP62CLQ9H1M0 184 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 RRAGCQ9HB90 399 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 CUEDC1Q9NWM3 386 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 SCHIP1Q9P0W5 487 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 LIMCH1Q9UPQ0 1083 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 YTHDC2Q9H6S0 1430 aaKnown RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 SOS1Q07889 1333 aaPredicted RBP6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 LRRC37A3O60309 1634 aa6.98□□□□□ -1.29
SNRPA1-209ENST00000560307 AKAP12Q02952 1782 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 SMARCA5O60264 1052 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TPM1P09493 284 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 RGPD1P0DJD0 1748 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 H2AFXP16104 143 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 SMTNP53814 917 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 GSDMDP57764 484 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TYRO3Q06418 890 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 EHHADHQ08426 723 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TLR1Q15399 786 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TPD52L1Q16890 204 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 SPATA31D1Q6ZQQ2 1576 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 ATCAYQ86WG3 371 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 C16orf71Q8IYS4 520 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TSPYL6Q8N831 410 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 ABTB2Q8N961 1025 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 DMRTB1Q96MA1 342 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 C8orf37Q96NL8 207 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 SLC4A9Q96Q91 983 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 INSM2Q96T92 566 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 DUSP9Q99956 384 aaKnown RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 NOL10Q9BSC4 688 aaKnown RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 C2orf49Q9BVC5 232 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TM6SF1Q9BZW5 370 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 SIGLEC1Q9BZZ2 1709 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 L2HGDHQ9H9P8 463 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 ARGLU1Q9NWB6 273 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 VTI1BQ9UEU0 232 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 PARP2Q9UGN5 583 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 ZNF232Q9UNY5 417 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 SMC3Q9UQE7 1217 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 MRVI1Q9Y6F6 885 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 V9GYY5 206 aaPredicted RBP6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 TTC21AQ8NDW8 1320 aa6.97□□□□□ -1.29
SNRPA1-209ENST00000560307 EDC4Q6P2E9 1401 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 FAM177BA6PVY3 158 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 C1QTNF9BB2RNN3 333 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 SCAMP3O14828 347 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 KIF3BO15066 747 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 CTAGE5O15320 804 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 CCP110O43303 1012 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 FZD6O60353 706 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 COBLO75128 1261 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 PDCP20941 246 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 SYT1P21579 422 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 KRT85P78386 507 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 FMR1Q06787 632 aaKnown RBP eCLIP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 PSMD2Q13200 908 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 DOC2BQ14184 412 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 PTPN14Q15678 1187 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 GIMAP6Q6P9H5 292 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 CCDC186Q7Z3E2 898 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 FILIP1Q7Z7B0 1213 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 OTUD7AQ8TE49 926 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 C16orf45Q96MC5 204 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 CITED4Q96RK1 184 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 SRRTQ9BXP5 876 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 LRRCC1Q9C099 1032 aa6.96□□□□□ -1.3
SNRPA1-209ENST00000560307 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms