RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 NDUFB9Q9Y6M9 179 aa28.31■■■□□ 2.12
CRNDE-209ENST00000560208 ZSWIM8A7E2V4 1837 aa28.3■■■□□ 2.12
CRNDE-209ENST00000560208 ATAD5Q96QE3 1844 aa28.3■■■□□ 2.12
CRNDE-209ENST00000560208 A0A0G2JLL6 359 aaPredicted RBP28.3■■■□□ 2.12
CRNDE-209ENST00000560208 CYP7A1P22680 504 aa28.3■■■□□ 2.12
CRNDE-209ENST00000560208 LACTBP83111 547 aaPredicted RBP28.3■■■□□ 2.12
CRNDE-209ENST00000560208 FASTKD5Q7L8L6 764 aaKnown RBP28.3■■■□□ 2.12
CRNDE-209ENST00000560208 PRRT2Q7Z6L0 340 aaPredicted RBP28.3■■■□□ 2.12
CRNDE-209ENST00000560208 KIF1BPQ96EK5 621 aa28.3■■■□□ 2.12
CRNDE-209ENST00000560208 DHX36Q9H2U1 1008 aaKnown RBP28.3■■■□□ 2.12
CRNDE-209ENST00000560208 CPA4Q9UI42 421 aa28.3■■■□□ 2.12
CRNDE-209ENST00000560208 PDE4DIPQ5VU43 2346 aa28.3■■■□□ 2.12
CRNDE-209ENST00000560208 IRX6P78412 446 aaPredicted RBP28.29■■■□□ 2.12
CRNDE-209ENST00000560208 MAPKAPK5Q8IW41 473 aa28.29■■■□□ 2.12
CRNDE-209ENST00000560208 BCL11AQ9H165 835 aa28.29■■■□□ 2.12
CRNDE-209ENST00000560208 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.29■■■□□ 2.12
CRNDE-209ENST00000560208 PI4KBQ9UBF8 816 aa28.29■■■□□ 2.12
CRNDE-209ENST00000560208 DYNLL1P63167 89 aaKnown RBP28.28■■■□□ 2.12
CRNDE-209ENST00000560208 GADL1Q6ZQY3 521 aa28.28■■■□□ 2.12
CRNDE-209ENST00000560208 CCDC84Q86UT8 332 aaPredicted RBP28.28■■■□□ 2.12
CRNDE-209ENST00000560208 CLASRPQ8N2M8 674 aaKnown RBP28.28■■■□□ 2.12
CRNDE-209ENST00000560208 ARHGAP39Q9C0H5 1083 aa28.28■■■□□ 2.12
CRNDE-209ENST00000560208 ANTXR1Q9H6X2 564 aa28.28■■■□□ 2.12
CRNDE-209ENST00000560208 HERC5Q9UII4 1024 aaKnown RBP28.28■■■□□ 2.12
CRNDE-209ENST00000560208 PCDHB15Q9Y5E8 787 aa28.28■■■□□ 2.12
CRNDE-209ENST00000560208 SIPA1L1O43166 1804 aa28.27■■■□□ 2.12
CRNDE-209ENST00000560208 KIAA0100Q14667 2235 aaKnown RBP28.27■■■□□ 2.12
CRNDE-209ENST00000560208 FLT1P17948 1338 aa28.27■■■□□ 2.12
CRNDE-209ENST00000560208 ADGRA2Q96PE1 1338 aa28.27■■■□□ 2.12
CRNDE-209ENST00000560208 TRIM75PA6NK02 468 aa28.27■■■□□ 2.12
CRNDE-209ENST00000560208 MAGEB6Q8N7X4 407 aa28.27■■■□□ 2.12
CRNDE-209ENST00000560208 EXOC6Q8TAG9 804 aa28.27■■■□□ 2.12
CRNDE-209ENST00000560208 PARK7Q99497 189 aaKnown RBP28.27■■■□□ 2.12
CRNDE-209ENST00000560208 MAP3K12Q12852 859 aa28.26■■■□□ 2.11
CRNDE-209ENST00000560208 ARMC5Q96C12 935 aa28.26■■■□□ 2.11
CRNDE-209ENST00000560208 PTCH2Q9Y6C5 1203 aa28.26■■■□□ 2.11
CRNDE-209ENST00000560208 RAB11FIP3O75154 756 aa28.25■■■□□ 2.11
CRNDE-209ENST00000560208 CYP2C8P10632 490 aa28.25■■■□□ 2.11
CRNDE-209ENST00000560208 CAP2P40123 477 aa28.25■■■□□ 2.11
CRNDE-209ENST00000560208 RRP1BQ14684 758 aaKnown RBP28.25■■■□□ 2.11
CRNDE-209ENST00000560208 MYH1P12882 1939 aa28.24■■■□□ 2.11
CRNDE-209ENST00000560208 ECM2O94769 699 aaPredicted RBP28.24■■■□□ 2.11
CRNDE-209ENST00000560208 GNRH1P01148 92 aa28.24■■■□□ 2.11
CRNDE-209ENST00000560208 IFIT2P09913 472 aaKnown RBP28.24■■■□□ 2.11
CRNDE-209ENST00000560208 MIGA1Q8NAN2 632 aa28.24■■■□□ 2.11
CRNDE-209ENST00000560208 PALD1Q9ULE6 856 aa28.24■■■□□ 2.11
CRNDE-209ENST00000560208 TMED8Q6PL24 325 aaPredicted RBP28.23■■■□□ 2.11
CRNDE-209ENST00000560208 CERS3Q8IU89 383 aa28.23■■■□□ 2.11
CRNDE-209ENST00000560208 FOXP4Q8IVH2 680 aaPredicted RBP28.23■■■□□ 2.11
CRNDE-209ENST00000560208 SAP30BPQ9UHR5 308 aaKnown RBP28.23■■■□□ 2.11
CRNDE-209ENST00000560208 SLC45A1Q9Y2W3 748 aa28.23■■■□□ 2.11
CRNDE-209ENST00000560208 PSMC4P43686 418 aa28.22■■■□□ 2.11
CRNDE-209ENST00000560208 SPP2Q13103 211 aa28.22■■■□□ 2.11
CRNDE-209ENST00000560208 SLC9C1Q4G0N8 1177 aa28.22■■■□□ 2.11
CRNDE-209ENST00000560208 METTL16Q86W50 562 aaKnown RBP28.22■■■□□ 2.11
CRNDE-209ENST00000560208 TBC1D2Q9BYX2 928 aa28.22■■■□□ 2.11
CRNDE-209ENST00000560208 USP17L5A8MUK1 530 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 BCRP11274 1271 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 CTGFP29279 349 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 TTF1Q15361 905 aaPredicted RBP28.21■■■□□ 2.11
CRNDE-209ENST00000560208 NBPF11Q86T75 865 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 CRACR2BQ8N4Y2 399 aaPredicted RBP28.21■■■□□ 2.11
CRNDE-209ENST00000560208 ZNF280CQ8ND82 737 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.21■■■□□ 2.11
CRNDE-209ENST00000560208 TRIM47Q96LD4 638 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 MGAMO43451 1857 aa28.21■■■□□ 2.11
CRNDE-209ENST00000560208 RBBP6Q7Z6E9 1792 aaKnown RBP28.2■■■□□ 2.11
CRNDE-209ENST00000560208 POTEFA5A3E0 1075 aa28.2■■■□□ 2.1
CRNDE-209ENST00000560208 USP5P45974 858 aa28.2■■■□□ 2.1
CRNDE-209ENST00000560208 PRMT2P55345 433 aa28.2■■■□□ 2.1
CRNDE-209ENST00000560208 TRIM34Q9BYJ4 488 aa28.2■■■□□ 2.1
CRNDE-209ENST00000560208 DNAJC18Q9H819 358 aa28.2■■■□□ 2.1
CRNDE-209ENST00000560208 AGTPBP1Q9UPW5 1226 aa28.2■■■□□ 2.1
CRNDE-209ENST00000560208 FMNL1O95466 1100 aaPredicted RBP28.19■■■□□ 2.1
CRNDE-209ENST00000560208 ZNF333Q96JL9 665 aa28.19■■■□□ 2.1
CRNDE-209ENST00000560208 HLA-DOAP06340 250 aa28.18■■■□□ 2.1
CRNDE-209ENST00000560208 HOXD10P28358 340 aa28.18■■■□□ 2.1
CRNDE-209ENST00000560208 SLC4A8Q2Y0W8 1093 aa28.18■■■□□ 2.1
CRNDE-209ENST00000560208 PROCA1Q8NCQ7 364 aaPredicted RBP28.18■■■□□ 2.1
CRNDE-209ENST00000560208 DNAJC2Q99543 621 aaKnown RBP28.18■■■□□ 2.1
CRNDE-209ENST00000560208 AS3MTQ9HBK9 375 aa28.18■■■□□ 2.1
CRNDE-209ENST00000560208 GOLIM4O00461 696 aa28.17■■■□□ 2.1
CRNDE-209ENST00000560208 ASNSP08243 561 aa28.17■■■□□ 2.1
CRNDE-209ENST00000560208 TREML2Q5T2D2 321 aa28.17■■■□□ 2.1
CRNDE-209ENST00000560208 SRRDQ9UH36 339 aa28.17■■■□□ 2.1
CRNDE-209ENST00000560208 LOC285556D6RIA3 1793 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 OSBPP22059 807 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 HMGCS2P54868 508 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 JAG1P78504 1218 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 SLC9C2Q5TAH2 1124 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 SMCR8Q8TEV9 937 aaPredicted RBP28.16■■■□□ 2.1
CRNDE-209ENST00000560208 TMEM106CQ9BVX2 250 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 DCTPP1Q9H773 170 aa28.16■■■□□ 2.1
CRNDE-209ENST00000560208 PDE6AP16499 860 aa28.15■■■□□ 2.1
CRNDE-209ENST00000560208 SH3TC2Q8TF17 1288 aa28.15■■■□□ 2.1
CRNDE-209ENST00000560208 RIOK1Q9BRS2 568 aaKnown RBP28.15■■■□□ 2.1
CRNDE-209ENST00000560208 WDR18Q9BV38 432 aa28.15■■■□□ 2.1
CRNDE-209ENST00000560208 BRCA2P51587 3418 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 MAGEB6P1A0A0J9YX57 407 aa28.14■■■□□ 2.1
CRNDE-209ENST00000560208 SMARCA5O60264 1052 aaPredicted RBP28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms