RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 PTPDC1A2A3K4 754 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 CCDC69A6NI79 296 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 SMIM22K7EJ46 135 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 ZBTB43O43298 467 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 JAK2O60674 1132 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 CRKP46108 304 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 APOBEC3HQ6NTF7 200 aaKnown RBP16.95■□□□□ 0.3
ZEB1-218ENST00000560196 SYNE3Q6ZMZ3 975 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 MAPKAPK5Q8IW41 473 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
ZEB1-218ENST00000560196 ZNF287Q9HBT7 754 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 NAP1L2Q9ULW6 460 aaPredicted RBP16.95■□□□□ 0.3
ZEB1-218ENST00000560196 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
ZEB1-218ENST00000560196 F8W031 263 aaPredicted RBP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 F13A1P00488 732 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 POLR3DP05423 398 aaPredicted RBP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 VIL1P09327 827 aaKnown RBP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 PPP2R5BQ15173 497 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 LARGE2Q8N3Y3 721 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 NCOA5Q9HCD5 579 aaKnown RBP16.94■□□□□ 0.3
ZEB1-218ENST00000560196 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 SLC12A7Q9Y666 1083 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 TNKSO95271 1327 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 LTBP3Q9NS15 1303 aa16.94■□□□□ 0.3
ZEB1-218ENST00000560196 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
ZEB1-218ENST00000560196 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
ZEB1-218ENST00000560196 CDKL5O76039 1030 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
ZEB1-218ENST00000560196 SCNN1DP51172 638 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 ZNF277Q9NRM2 450 aaPredicted RBP16.93■□□□□ 0.3
ZEB1-218ENST00000560196 TCP11L1Q9NUJ3 509 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 USP40Q9NVE5 1235 aa16.93■□□□□ 0.3
ZEB1-218ENST00000560196 GOLGA8AA7E2F4 631 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 CPLX1O14810 134 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 PRDM1O75626 825 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 EVX2Q03828 476 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
ZEB1-218ENST00000560196 TTC6Q86TZ1 520 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 KIAA0825Q8IV33 1275 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 STK11IPQ8N1F8 1099 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 ENAHQ8N8S7 591 aaPredicted RBP16.92■□□□□ 0.3
ZEB1-218ENST00000560196 ANKS1AQ92625 1134 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 GMLQ99445 158 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
ZEB1-218ENST00000560196 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
ZEB1-218ENST00000560196 FER1L6Q2WGJ9 1857 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
ZEB1-218ENST00000560196 CALM1P0DP23 149 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 CALM2P0DP24 149 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 CALM3P0DP25 149 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 PLCD1P51178 756 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 SKOR2Q2VWA4 1001 aaPredicted RBP16.91■□□□□ 0.3
ZEB1-218ENST00000560196 ZNF654Q8IZM8 581 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 ZKSCAN3Q9BRR0 538 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
ZEB1-218ENST00000560196 COL4A5P29400 1685 aa16.91■□□□□ 0.3
ZEB1-218ENST00000560196 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
ZEB1-218ENST00000560196 DDAH1O94760 285 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 FDPSP14324 419 aaKnown RBP16.9■□□□□ 0.3
ZEB1-218ENST00000560196 MMP14P50281 582 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 GABPAQ06546 454 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 NTRK3Q16288 839 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
ZEB1-218ENST00000560196 FOXD4L5Q5VV16 416 aaPredicted RBP16.9■□□□□ 0.3
ZEB1-218ENST00000560196 MICU3Q86XE3 530 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 DGKHQ86XP1 1220 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 FOXD4L4Q8WXT5 416 aaPredicted RBP16.9■□□□□ 0.3
ZEB1-218ENST00000560196 DDX11Q96FC9 970 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 DYNLL2Q96FJ2 89 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 OSBPL5Q9H0X9 879 aaPredicted RBP16.9■□□□□ 0.3
ZEB1-218ENST00000560196 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 STK36Q9NRP7 1315 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 MYH1P12882 1939 aa16.9■□□□□ 0.3
ZEB1-218ENST00000560196 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 IFNAR1P17181 557 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 RASA1P20936 1047 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 CDC27P30260 824 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 CDK8P49336 464 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 RTN1Q16799 776 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 MCTP1Q6DN14 999 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 CATIPQ7Z7H3 387 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
ZEB1-218ENST00000560196 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
ZEB1-218ENST00000560196 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
ZEB1-218ENST00000560196 ORC3Q9UBD5 711 aaPredicted RBP16.89■□□□□ 0.29
ZEB1-218ENST00000560196 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms