RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 NDUFAB1O14561 156 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 CYP27B1O15528 508 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 EIF2S2P20042 333 aaKnown RBP21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 TUBB2AQ13885 445 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 ANKRD1Q15327 319 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 WDR93Q6P2C0 686 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 TUBB2BQ9BVA1 445 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 FAM208AQ9UK61 1670 aaKnown RBP21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 NLRP12P59046 1061 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 CRACR2AQ9BSW2 395 aa21.71■■□□□ 1.07
SEMA4B-215ENST00000560089 KIF5CO60282 957 aa21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 TOM1O60784 492 aa21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 TFRCP02786 760 aaKnown RBP21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 GBP2P32456 591 aaPredicted RBP21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 SLC39A6Q13433 755 aa21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 SNCBQ16143 134 aa21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 SPATS2Q86XZ4 545 aaKnown RBP21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 PI4K2BQ8TCG2 481 aa21.7■■□□□ 1.07
SEMA4B-215ENST00000560089 F6X3S4 739 aa21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 ADD1P35611 737 aaKnown RBP21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 MTX1Q13505 466 aa21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 FMR1NBQ8N0W7 255 aaPredicted RBP21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 RUFY2Q8WXA3 655 aa21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 PAIP2Q9BPZ3 127 aaKnown RBP21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 RASSF9O75901 435 aa21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 PHKG2P15735 406 aa21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 CCT4P50991 539 aaKnown RBP21.7■■□□□ 1.06
SEMA4B-215ENST00000560089 IKBKBO14920 756 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 PSMA5P28066 241 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 AKAP17AQ02040 695 aaKnown RBP21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 NOA1Q8NC60 698 aaKnown RBP21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 MRPS27Q92552 414 aaKnown RBP21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 ZBTB10Q96DT7 871 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 SPDL1Q96EA4 605 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 VCPKMTQ9H867 229 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 RPS6KL1Q9Y6S9 549 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 ZC3H4Q9UPT8 1303 aaKnown RBP21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 LMO7Q8WWI1 1683 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 PRAMEF22A3QJZ6 481 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 CCDC175P0C221 793 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 TLDC1Q6P9B6 456 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 USP28Q96RU2 1077 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 FANCLQ9NW38 375 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 LRRC37A3O60309 1634 aa21.69■■□□□ 1.06
SEMA4B-215ENST00000560089 PFKFB2O60825 505 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 RPS6KA3P51812 740 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 ATP8B2P98198 1209 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 ZNF569Q5MCW4 686 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 COG1Q8WTW3 980 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 HSD3B7Q9H2F3 369 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 ATP6V0A4Q9HBG4 840 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 A0A1B0GVL5 298 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 CTAGE9A4FU28 777 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 RPSAP08865 295 aaKnown RBP21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 PDHBP11177 359 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 PSMD2Q13200 908 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 COL9A3Q14050 684 aaPredicted RBP21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 RNF187Q5TA31 235 aaPredicted RBP21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 MICALCLQ6ZW33 695 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 TEX13AQ9BXU3 409 aaPredicted RBP21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 SLC40A1Q9NP59 571 aa21.68■■□□□ 1.06
SEMA4B-215ENST00000560089 ADKP55263 362 aaKnown RBP21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 NECTIN1Q15223 517 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 BLOC1S2Q6QNY1 142 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 ANXA1P04083 346 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 SLC3A2P08195 630 aaKnown RBP21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 SLC8A3P57103 927 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 E2F5Q15329 346 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 CREB3L3Q68CJ9 461 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 CCDC148Q8NFR7 591 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 GDAP1L1Q96MZ0 367 aa21.67■■□□□ 1.06
SEMA4B-215ENST00000560089 RCSD1Q6JBY9 416 aa21.66■■□□□ 1.06
SEMA4B-215ENST00000560089 SAAL1Q96ER3 474 aa21.66■■□□□ 1.06
SEMA4B-215ENST00000560089 SCLT1Q96NL6 688 aa21.66■■□□□ 1.06
SEMA4B-215ENST00000560089 ANKRD18BA2A2Z9 1011 aa21.66■■□□□ 1.06
SEMA4B-215ENST00000560089 WHAMMP3Q1A5X7 153 aa21.66■■□□□ 1.06
SEMA4B-215ENST00000560089 KIAA1328Q86T90 577 aa21.66■■□□□ 1.06
SEMA4B-215ENST00000560089 PECAM1P16284 738 aaPredicted RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 FOSBP53539 338 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 EIF4A1P60842 406 aaKnown RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 SNX1Q13596 522 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 CCDC13Q8IYE1 715 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 RBM8AQ9Y5S9 174 aaKnown RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 PLCB4Q15147 1175 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 CCDC50Q8IVM0 306 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 PARP9Q8IXQ6 854 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 TC2NQ8N9U0 490 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 ZNF396Q96N95 335 aaPredicted RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 KDM6AO15550 1401 aaPredicted RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 PPP1R12BO60237 982 aaPredicted RBP21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 NDUFA8P51970 172 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 MTF1Q14872 753 aa21.65■■□□□ 1.06
SEMA4B-215ENST00000560089 ENO4A6NNW6 628 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 AGPSO00116 658 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 TOB2Q14106 344 aaPredicted RBP21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 RSRC1Q96IZ7 334 aaKnown RBP21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 PHLPP1O60346 1717 aa21.64■■□□□ 1.05
SEMA4B-215ENST00000560089 MCM3P25205 808 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms