RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 SLC12A7Q9Y666 1083 aa27.55■■■□□ 2
TM2D3-209ENST00000560013 ZBTB43O43298 467 aa27.55■■■□□ 2
TM2D3-209ENST00000560013 TRAK2O60296 914 aa27.55■■■□□ 2
TM2D3-209ENST00000560013 METAP2P50579 478 aaKnown RBP eCLIP27.55■■■□□ 2
TM2D3-209ENST00000560013 RAB11FIP4Q86YS3 637 aa27.55■■■□□ 2
TM2D3-209ENST00000560013 MYH1P12882 1939 aa27.55■■■□□ 2
TM2D3-209ENST00000560013 TCHHQ07283 1943 aa27.55■■■□□ 2
TM2D3-209ENST00000560013 TEKT1Q969V4 418 aa27.54■■■□□ 2
TM2D3-209ENST00000560013 CPLX1O14810 134 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 SCNN1DP51172 638 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 SOGA3Q5TF21 947 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 SYNE3Q6ZMZ3 975 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 IQCA1Q86XH1 822 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 CHAMP1Q96JM3 812 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 ROBO3Q96MS0 1386 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 TNKSO95271 1327 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 FLT1P17948 1338 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 DDX60LQ5H9U9 1706 aaKnown RBP27.53■■■□□ 2
TM2D3-209ENST00000560013 POLR3DP05423 398 aaPredicted RBP27.53■■■□□ 2
TM2D3-209ENST00000560013 NT5C2P49902 561 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 SEC23AQ15436 765 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 SLC4A8Q2Y0W8 1093 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 ZSCAN10Q96SZ4 725 aaPredicted RBP27.53■■■□□ 2
TM2D3-209ENST00000560013 MRIQ9BWK5 157 aa27.53■■■□□ 2
TM2D3-209ENST00000560013 CDC37L1Q7L3B6 337 aa27.52■■■□□ 2
TM2D3-209ENST00000560013 MICU3Q86XE3 530 aa27.52■■■□□ 2
TM2D3-209ENST00000560013 SKOR2Q2VWA4 1001 aaPredicted RBP27.51■■□□□ 1.99
TM2D3-209ENST00000560013 SAP30BPQ9UHR5 308 aaKnown RBP27.51■■□□□ 1.99
TM2D3-209ENST00000560013 PSME4Q14997 1843 aa27.51■■□□□ 1.99
TM2D3-209ENST00000560013 RXRAP19793 462 aa27.51■■□□□ 1.99
TM2D3-209ENST00000560013 LMBRD1Q9NUN5 540 aa27.51■■□□□ 1.99
TM2D3-209ENST00000560013 ADAMTSL1Q8N6G6 1762 aa27.5■■□□□ 1.99
TM2D3-209ENST00000560013 BRCA1P38398 1863 aaKnown RBP27.5■■□□□ 1.99
TM2D3-209ENST00000560013 FDPSP14324 419 aaKnown RBP27.5■■□□□ 1.99
TM2D3-209ENST00000560013 ADD1P35611 737 aaKnown RBP27.5■■□□□ 1.99
TM2D3-209ENST00000560013 PLCD1P51178 756 aa27.5■■□□□ 1.99
TM2D3-209ENST00000560013 FOXD4L6Q3SYB3 417 aaPredicted RBP27.5■■□□□ 1.99
TM2D3-209ENST00000560013 FOXD4L3Q6VB84 417 aaPredicted RBP27.5■■□□□ 1.99
TM2D3-209ENST00000560013 KIAA0825Q8IV33 1275 aa27.5■■□□□ 1.99
TM2D3-209ENST00000560013 VPS33BQ9H267 617 aa27.5■■□□□ 1.99
TM2D3-209ENST00000560013 GOLGA8AA7E2F4 631 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 YDJCA8MPS7 323 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 H3BQV1 296 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 CRKP46108 304 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 HDLBPQ00341 1268 aaKnown RBP27.49■■□□□ 1.99
TM2D3-209ENST00000560013 IFFO2Q5TF58 517 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 ENAHQ8N8S7 591 aaPredicted RBP27.49■■□□□ 1.99
TM2D3-209ENST00000560013 SGIP1Q9BQI5 828 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 MYL10Q9BUA6 226 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 NID2Q14112 1375 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 ECM29Q5VYK3 1845 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 CDC27P30260 824 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 RCAN1P53805 252 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 CPLX2Q6PUV4 134 aaKnown RBP27.49■■□□□ 1.99
TM2D3-209ENST00000560013 DYNLL2Q96FJ2 89 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 USP40Q9NVE5 1235 aa27.49■■□□□ 1.99
TM2D3-209ENST00000560013 PPFIA3O75145 1194 aa27.48■■□□□ 1.99
TM2D3-209ENST00000560013 PRPF40AO75400 957 aaKnown RBP27.48■■□□□ 1.99
TM2D3-209ENST00000560013 CDKL5O76039 1030 aa27.48■■□□□ 1.99
TM2D3-209ENST00000560013 DALRD3Q5D0E6 543 aaKnown RBP27.48■■□□□ 1.99
TM2D3-209ENST00000560013 FAM47AQ5JRC9 791 aa27.48■■□□□ 1.99
TM2D3-209ENST00000560013 APOBEC3HQ6NTF7 200 aaKnown RBP27.48■■□□□ 1.99
TM2D3-209ENST00000560013 ZDHHC15Q96MV8 337 aa27.48■■□□□ 1.99
TM2D3-209ENST00000560013 TSPY2A6NKD2 308 aa27.47■■□□□ 1.99
TM2D3-209ENST00000560013 CCDC144CPQ8IYA2 1237 aa27.47■■□□□ 1.99
TM2D3-209ENST00000560013 ZNF654Q8IZM8 581 aa27.47■■□□□ 1.99
TM2D3-209ENST00000560013 MKNK2Q9HBH9 465 aa27.47■■□□□ 1.99
TM2D3-209ENST00000560013 FAM217BQ9NTX9 383 aaPredicted RBP27.47■■□□□ 1.99
TM2D3-209ENST00000560013 PPP1R1BQ9UD71 204 aaPredicted RBP27.47■■□□□ 1.99
TM2D3-209ENST00000560013 IFIT1BQ5T764 474 aaKnown RBP27.47■■□□□ 1.99
TM2D3-209ENST00000560013 LARGE2Q8N3Y3 721 aa27.47■■□□□ 1.99
TM2D3-209ENST00000560013 ZNF287Q9HBT7 754 aa27.47■■□□□ 1.99
TM2D3-209ENST00000560013 ZNF277Q9NRM2 450 aaPredicted RBP27.47■■□□□ 1.99
TM2D3-209ENST00000560013 ORC3Q9UBD5 711 aaPredicted RBP27.47■■□□□ 1.99
TM2D3-209ENST00000560013 WDHD1O75717 1129 aaPredicted RBP27.46■■□□□ 1.99
TM2D3-209ENST00000560013 CDC42EP5Q6NZY7 148 aa27.46■■□□□ 1.99
TM2D3-209ENST00000560013 CD2APQ9Y5K6 639 aa27.46■■□□□ 1.99
TM2D3-209ENST00000560013 PSDA5PKW4 1024 aaPredicted RBP27.45■■□□□ 1.99
TM2D3-209ENST00000560013 FERMT3Q86UX7 667 aa27.45■■□□□ 1.99
TM2D3-209ENST00000560013 PICALMQ13492 652 aa27.44■■□□□ 1.98
TM2D3-209ENST00000560013 NTRK3Q16288 839 aa27.44■■□□□ 1.98
TM2D3-209ENST00000560013 C16orf86Q6ZW13 317 aa27.44■■□□□ 1.98
TM2D3-209ENST00000560013 ZNF444Q8N0Y2 327 aaPredicted RBP27.44■■□□□ 1.98
TM2D3-209ENST00000560013 TFAP4Q01664 338 aa27.44■■□□□ 1.98
TM2D3-209ENST00000560013 RTN1Q16799 776 aa27.44■■□□□ 1.98
TM2D3-209ENST00000560013 SERPINA10Q9UK55 444 aa27.44■■□□□ 1.98
TM2D3-209ENST00000560013 CCDC196A0A1B0GTZ2 297 aa27.43■■□□□ 1.98
TM2D3-209ENST00000560013 GSE1Q14687 1217 aa27.43■■□□□ 1.98
TM2D3-209ENST00000560013 PPP2R5BQ15173 497 aa27.43■■□□□ 1.98
TM2D3-209ENST00000560013 FANCBQ8NB91 859 aa27.43■■□□□ 1.98
TM2D3-209ENST00000560013 FER1L6Q2WGJ9 1857 aa27.43■■□□□ 1.98
TM2D3-209ENST00000560013 NMT2O60551 498 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 CATIPQ7Z7H3 387 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 SLC44A5Q8NCS7 719 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 NUP133Q8WUM0 1156 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 ZSCAN16Q9H4T2 348 aaPredicted RBP27.42■■□□□ 1.98
TM2D3-209ENST00000560013 DDX4Q9NQI0 724 aaKnown RBP27.42■■□□□ 1.98
TM2D3-209ENST00000560013 CNPY2Q9Y2B0 182 aa27.42■■□□□ 1.98
TM2D3-209ENST00000560013 DDX49Q9Y6V7 483 aaKnown RBP27.42■■□□□ 1.98
TM2D3-209ENST00000560013 IARSP41252 1262 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms