RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 SAP30BPQ9UHR5 308 aaKnown RBP16.47■□□□□ 0.23
CHRNB4-204ENST00000559849 FOXN1O15353 648 aa16.46■□□□□ 0.23
CHRNB4-204ENST00000559849 SLURP2P0DP57 97 aa16.46■□□□□ 0.23
CHRNB4-204ENST00000559849 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
CHRNB4-204ENST00000559849 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
CHRNB4-204ENST00000559849 APPBP2Q92624 585 aa16.46■□□□□ 0.23
CHRNB4-204ENST00000559849 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
CHRNB4-204ENST00000559849 GJA5P36382 358 aa16.46■□□□□ 0.22
CHRNB4-204ENST00000559849 PPATQ06203 517 aa16.46■□□□□ 0.22
CHRNB4-204ENST00000559849 METTL16Q86W50 562 aaKnown RBP16.46■□□□□ 0.22
CHRNB4-204ENST00000559849 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.22
CHRNB4-204ENST00000559849 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.22
CHRNB4-204ENST00000559849 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.22
CHRNB4-204ENST00000559849 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
CHRNB4-204ENST00000559849 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
CHRNB4-204ENST00000559849 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
CHRNB4-204ENST00000559849 TRIM34Q9BYJ4 488 aa16.45■□□□□ 0.22
CHRNB4-204ENST00000559849 DCP1AQ9NPI6 582 aaPredicted RBP16.45■□□□□ 0.22
CHRNB4-204ENST00000559849 FAM196BA6NMK8 535 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 SCYL3Q8IZE3 742 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 PICK1Q9NRD5 415 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 MCM9Q9NXL9 1143 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 PRKAB2O43741 272 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 GTF2A2P52657 109 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 PPIL2Q13356 520 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 RNF186Q9NXI6 227 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 SAGE1Q9NXZ1 904 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
CHRNB4-204ENST00000559849 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 IRF6O14896 467 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 TRPA1O75762 1119 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 EHD4Q9H223 541 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 SERPINB13Q9UIV8 391 aa16.43■□□□□ 0.22
CHRNB4-204ENST00000559849 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 NEFLP07196 543 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 CAP2P40123 477 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 PLCD1P51178 756 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 LAMB1P07942 1786 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 ALDH1A1P00352 501 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 PTPRAP18433 802 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 SNAPC2Q13487 334 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 OTUD7BQ6GQQ9 843 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 DNAJC18Q9H819 358 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 ZHX2Q9Y6X8 837 aa16.42■□□□□ 0.22
CHRNB4-204ENST00000559849 GPAA1O43292 621 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 GNAT2P19087 354 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 CETPP11597 493 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 PDE4AP27815 886 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 LBX1P52954 281 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 TSKSQ9UJT2 592 aa16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 BAZ2AQ9UIF9 1905 aaKnown RBP16.41■□□□□ 0.22
CHRNB4-204ENST00000559849 NAV1Q8NEY1 1877 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 CCL15-CCL14A0A0B4J2E2 113 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 CXCL11O14625 94 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 DOCK1Q14185 1865 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 CCL15Q16663 113 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 SEC62Q99442 399 aaKnown RBP16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
CHRNB4-204ENST00000559849 USP17L12C9JPN9 530 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 USP17L21D6R901 530 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 M0R2C6 588 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 ASNSP08243 561 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 PTPN18Q99952 460 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 GSG1L2A8MUP6 293 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 GABPAQ06546 454 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 BRI3BPQ8WY22 251 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 AFG3L2Q9Y4W6 797 aa16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
CHRNB4-204ENST00000559849 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 C12orf60Q5U649 245 aa16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 CFHR5Q9BXR6 569 aa16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 HELLSQ9NRZ9 838 aa16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 USP17L5A8MUK1 530 aa16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 APPP05067 770 aa16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 ARPP21Q9UBL0 812 aaPredicted RBP16.38■□□□□ 0.21
CHRNB4-204ENST00000559849 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
CHRNB4-204ENST00000559849 TBC1D8O95759 1140 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms