RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 SH3RF3Q8TEJ3 882 aaPredicted RBP14.99□□□□□ -0.01
SPG11-219ENST00000559822 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
SPG11-219ENST00000559822 TRIM47Q96LD4 638 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 PNMA3Q9UL41 463 aa14.99□□□□□ -0.01
SPG11-219ENST00000559822 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 PTPRFP10586 1907 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 SLC34A2O95436 690 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 CYP2C8P10632 490 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 OSBPP22059 807 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 CAP2P40123 477 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 ZAP70P43403 619 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 PABPC4Q13310 644 aaKnown RBP eCLIP14.98□□□□□ -0.01
SPG11-219ENST00000559822 PROCA1Q8NCQ7 364 aaPredicted RBP14.98□□□□□ -0.01
SPG11-219ENST00000559822 CCDC8Q9H0W5 538 aaPredicted RBP14.98□□□□□ -0.01
SPG11-219ENST00000559822 CHMP4BQ9H444 224 aaKnown RBP14.98□□□□□ -0.01
SPG11-219ENST00000559822 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 AGTPBP1Q9UPW5 1226 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 ZSWIM8A7E2V4 1837 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 PHIPQ8WWQ0 1821 aa14.98□□□□□ -0.01
SPG11-219ENST00000559822 FAM196BA6NMK8 535 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 SLURP2P0DP57 97 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 EN2P19622 333 aaPredicted RBP14.97□□□□□ -0.01
SPG11-219ENST00000559822 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
SPG11-219ENST00000559822 ZNF280CQ8ND82 737 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 PANK1Q8TE04 598 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 SH3TC2Q8TF17 1288 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 TGFBRAP1Q8WUH2 860 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 EAF2Q96CJ1 260 aaPredicted RBP14.97□□□□□ -0.01
SPG11-219ENST00000559822 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
SPG11-219ENST00000559822 FLT1P17948 1338 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 USP17L5A8MUK1 530 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 HMMRO75330 724 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 IDH1O75874 414 aaKnown RBP14.96□□□□□ -0.01
SPG11-219ENST00000559822 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
SPG11-219ENST00000559822 HLA-DOAP06340 250 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 GRK4P32298 578 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 SPP2Q13103 211 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 AACSQ86V21 672 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 FOXP4Q8IVH2 680 aaPredicted RBP14.96□□□□□ -0.01
SPG11-219ENST00000559822 GCC1Q96CN9 775 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 PIH1D3Q9NQM4 214 aaKnown RBP14.96□□□□□ -0.01
SPG11-219ENST00000559822 TLR7Q9NYK1 1049 aaKnown RBP14.96□□□□□ -0.01
SPG11-219ENST00000559822 DDX19BQ9UMR2 479 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 EXOC6BQ9Y2D4 811 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 ATAD5Q96QE3 1844 aa14.96□□□□□ -0.01
SPG11-219ENST00000559822 FOCADQ5VW36 1801 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 ASNSP08243 561 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 CYP7A1P22680 504 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 CTGFP29279 349 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 UBXN2AP68543 259 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 MAP3K12Q12852 859 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 ADGRA1Q86SQ6 560 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 MAPKAPK5Q8IW41 473 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 RPAP2Q8IXW5 612 aaPredicted RBP14.95□□□□□ -0.02
SPG11-219ENST00000559822 SLAIN1Q8ND83 568 aa14.95□□□□□ -0.02
SPG11-219ENST00000559822 LOC285556D6RIA3 1793 aa14.94□□□□□ -0.02
SPG11-219ENST00000559822 MYCP01106 439 aaPredicted RBP14.94□□□□□ -0.02
SPG11-219ENST00000559822 GCLCP48506 637 aaPredicted RBP14.94□□□□□ -0.02
SPG11-219ENST00000559822 CCDC84Q86UT8 332 aaPredicted RBP14.94□□□□□ -0.02
SPG11-219ENST00000559822 CLASRPQ8N2M8 674 aaKnown RBP14.94□□□□□ -0.02
SPG11-219ENST00000559822 NKX2-3Q8TAU0 364 aa14.94□□□□□ -0.02
SPG11-219ENST00000559822 KIF1BPQ96EK5 621 aa14.94□□□□□ -0.02
SPG11-219ENST00000559822 WDR18Q9BV38 432 aa14.94□□□□□ -0.02
SPG11-219ENST00000559822 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.94□□□□□ -0.02
SPG11-219ENST00000559822 BIN2Q9UBW5 565 aaPredicted RBP14.94□□□□□ -0.02
SPG11-219ENST00000559822 MGAMO43451 1857 aa14.94□□□□□ -0.02
SPG11-219ENST00000559822 CDK5RAP2Q96SN8 1893 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 TNPO2O14787 897 aaKnown RBP14.93□□□□□ -0.02
SPG11-219ENST00000559822 USP5P45974 858 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 HMGCS2P54868 508 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 PRKCZQ05513 592 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 TTF1Q15361 905 aaPredicted RBP14.93□□□□□ -0.02
SPG11-219ENST00000559822 FAM110CQ1W6H9 321 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 SH3D19Q5HYK7 790 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 TREML2Q5T2D2 321 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 METTL16Q86W50 562 aaKnown RBP14.93□□□□□ -0.02
SPG11-219ENST00000559822 MAGEB6Q8N7X4 407 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 RHPN1Q8TCX5 695 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 COA7Q96BR5 231 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 PALD1Q9ULE6 856 aa14.93□□□□□ -0.02
SPG11-219ENST00000559822 MYO5AQ9Y4I1 1855 aaKnown RBP14.93□□□□□ -0.02
SPG11-219ENST00000559822 SIPA1L1O43166 1804 aa14.92□□□□□ -0.02
SPG11-219ENST00000559822 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
SPG11-219ENST00000559822 CENPFP49454 3210 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 C19orf81C9J6K1 198 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 IFIT2P09913 472 aaKnown RBP14.91□□□□□ -0.02
SPG11-219ENST00000559822 CAPN2P17655 700 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 BACE1P56817 501 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 DYNLL1P63167 89 aaKnown RBP14.91□□□□□ -0.02
SPG11-219ENST00000559822 IRX3P78415 501 aaPredicted RBP14.91□□□□□ -0.02
SPG11-219ENST00000559822 RRP1BQ14684 758 aaKnown RBP14.91□□□□□ -0.02
SPG11-219ENST00000559822 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 MIGA1Q8NAN2 632 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 PXYLP1Q8TE99 480 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.91□□□□□ -0.02
SPG11-219ENST00000559822 IL1RAPL2Q9NP60 686 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 ZBTB40Q9NUA8 1239 aa14.91□□□□□ -0.02
SPG11-219ENST00000559822 SAP30BPQ9UHR5 308 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms