RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 MRS2Q9HD23 443 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 VTI1BQ9UEU0 232 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 ADGRE2Q9UHX3 823 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 PCOLCE2Q9UKZ9 415 aa7.33□□□□□ -1.24
CTDSPL2-207ENST00000559738 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
CTDSPL2-207ENST00000559738 CYP27C1Q4G0S4 372 aa7.32□□□□□ -1.24
CTDSPL2-207ENST00000559738 ZBTB37Q5TC79 503 aa7.32□□□□□ -1.24
CTDSPL2-207ENST00000559738 TP53INP2Q8IXH6 220 aa7.32□□□□□ -1.24
CTDSPL2-207ENST00000559738 FLCNQ8NFG4 579 aa7.32□□□□□ -1.24
CTDSPL2-207ENST00000559738 TLR6Q9Y2C9 796 aa7.32□□□□□ -1.24
CTDSPL2-207ENST00000559738 F6X3S4 739 aa7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 FANCGO15287 622 aa7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 PAX4O43316 350 aa7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 LEFTY1O75610 366 aa7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 MFAP1P55081 439 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 CYFIP1Q7L576 1253 aa7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 ELMO3Q96BJ8 720 aa7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 SSU72Q9NP77 194 aaKnown RBP7.31□□□□□ -1.24
CTDSPL2-207ENST00000559738 TRIM26Q12899 539 aaPredicted RBP7.3□□□□□ -1.24
CTDSPL2-207ENST00000559738 WIPI1Q5MNZ9 446 aaPredicted RBP7.3□□□□□ -1.24
CTDSPL2-207ENST00000559738 FAM181AQ8N9Y4 354 aa7.3□□□□□ -1.24
CTDSPL2-207ENST00000559738 PHC3Q8NDX5 983 aa7.3□□□□□ -1.24
CTDSPL2-207ENST00000559738 PRAMEF27A3QJZ7 478 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 GFRA2O00451 464 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 MRPL58Q14197 206 aaKnown RBP7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 ZNF326Q5BKZ1 582 aaKnown RBP7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 HDXQ7Z353 690 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 DUSP23Q9BVJ7 150 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 KRTAP9-9Q9BYP9 154 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 KRTAP9-4Q9BYQ2 154 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 PICK1Q9NRD5 415 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 U3KQE9 123 aa7.29□□□□□ -1.24
CTDSPL2-207ENST00000559738 RLBP1P12271 317 aa7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 ZNF574Q6ZN55 896 aaPredicted RBP7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 PLD6Q8N2A8 252 aaKnown RBP7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 AGBL5Q8NDL9 886 aa7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 BCL7CQ8WUZ0 217 aaPredicted RBP7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 MIR1-1HGQ9H1L0 117 aa7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 FBRSQ9HAH7 460 aa7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 SNCAIPQ9Y6H5 919 aa7.28□□□□□ -1.24
CTDSPL2-207ENST00000559738 LMNB1P20700 586 aa7.27□□□□□ -1.25
CTDSPL2-207ENST00000559738 WNT10AQ9GZT5 417 aa7.27□□□□□ -1.25
CTDSPL2-207ENST00000559738 SLC5A6Q9Y289 635 aa7.27□□□□□ -1.25
CTDSPL2-207ENST00000559738 SLBPQ14493 270 aaKnown RBP eCLIP7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 NKG7Q16617 165 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 LDLRAD1Q5T700 205 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 BNC2Q6ZN30 1099 aaPredicted RBP7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 FAM214BQ7L5A3 538 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 NETO1Q8TDF5 533 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 JARID2Q92833 1246 aaPredicted RBP7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 RHOVQ96L33 236 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 RSRP1Q9BUV0 290 aa7.26□□□□□ -1.25
CTDSPL2-207ENST00000559738 PF4P02776 101 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 CAMK2GQ13555 558 aaPredicted RBP7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 TSNAXIP1Q2TAA8 658 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 CBLL1Q75N03 491 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 CDC37L1Q7L3B6 337 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 ARMCX6Q7L4S7 300 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 WFDC3Q8IUB2 231 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 TMEM74Q96NL1 305 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 COPRSQ9NQ92 184 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 PRDM10Q9NQV6 1147 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
CTDSPL2-207ENST00000559738 CEACAM5P06731 702 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 GRK4P32298 578 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 LMNB2Q03252 620 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 BNIP3Q12983 259 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 PLCL1Q15111 1095 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 ERMP1Q7Z2K6 904 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 SPRED2Q7Z698 418 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 KCT2Q8NC54 265 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 MISP3Q96FF7 219 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 HEXIM2Q96MH2 286 aaKnown RBP7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 FMNL2Q96PY5 1086 aa7.24□□□□□ -1.25
CTDSPL2-207ENST00000559738 FAM221AA4D161 298 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 LRIG2O94898 1065 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 F13A1P00488 732 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 ITIH2P19823 946 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 GBP2P32456 591 aaPredicted RBP7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 ITGAEP38570 1179 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 OXCT1P55809 520 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 ETF1P62495 437 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 RPL6Q02878 288 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 IFI16Q16666 785 aaKnown RBP7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 RELL1Q8IUW5 271 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 KBTBD4Q9NVX7 518 aa7.23□□□□□ -1.25
CTDSPL2-207ENST00000559738 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
CTDSPL2-207ENST00000559738 MINDY4BA8MYZ0 360 aa7.22□□□□□ -1.25
CTDSPL2-207ENST00000559738 RBAK-RBAKDNI3L0D1 243 aa7.22□□□□□ -1.25
CTDSPL2-207ENST00000559738 CILPO75339 1184 aa7.22□□□□□ -1.25
CTDSPL2-207ENST00000559738 SLITRK5O94991 958 aa7.22□□□□□ -1.25
CTDSPL2-207ENST00000559738 EOMESO95936 686 aa7.22□□□□□ -1.25
CTDSPL2-207ENST00000559738 GARTP22102 1010 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms