RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 MYH2Q9UKX2 1941 aa10.88□□□□□ -0.67
HMG20A-209ENST00000559728 USP2O75604 605 aaPredicted RBP10.87□□□□□ -0.67
HMG20A-209ENST00000559728 CYP2D6P10635 497 aa10.87□□□□□ -0.67
HMG20A-209ENST00000559728 MAP3K11Q16584 847 aa10.87□□□□□ -0.67
HMG20A-209ENST00000559728 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
HMG20A-209ENST00000559728 CWC27Q6UX04 472 aaKnown RBP10.87□□□□□ -0.67
HMG20A-209ENST00000559728 AIDAQ96BJ3 306 aa10.87□□□□□ -0.67
HMG20A-209ENST00000559728 NOL10Q9BSC4 688 aaKnown RBP10.87□□□□□ -0.67
HMG20A-209ENST00000559728 CRNKL1Q9BZJ0 848 aaKnown RBP10.87□□□□□ -0.67
HMG20A-209ENST00000559728 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
HMG20A-209ENST00000559728 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
HMG20A-209ENST00000559728 PATL2C9JE40 543 aaKnown RBP10.86□□□□□ -0.67
HMG20A-209ENST00000559728 SGSM2O43147 1006 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 CELF2O95319 508 aaKnown RBP10.86□□□□□ -0.67
HMG20A-209ENST00000559728 TIE1P35590 1138 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 TNNI2P48788 182 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 PLCD1P51178 756 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 GABPAQ06546 454 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 RRP1BQ14684 758 aaKnown RBP10.86□□□□□ -0.67
HMG20A-209ENST00000559728 CTR9Q6PD62 1173 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 SAP30BPQ9UHR5 308 aaKnown RBP10.86□□□□□ -0.67
HMG20A-209ENST00000559728 TACC3Q9Y6A5 838 aa10.86□□□□□ -0.67
HMG20A-209ENST00000559728 DDX60LQ5H9U9 1706 aaKnown RBP10.86□□□□□ -0.67
HMG20A-209ENST00000559728 CCDC171Q6TFL3 1326 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 TTLL13PA6NNM8 815 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 PHF20L1A8MW92 1017 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 HIP1O00291 1037 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 HSPD1P10809 573 aaKnown RBP10.85□□□□□ -0.67
HMG20A-209ENST00000559728 USP5P45974 858 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 APLP1P51693 650 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 JAG1P78504 1218 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 HTRA3P83110 453 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 LDLRAD1Q5T700 205 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 MIGA2Q7L4E1 593 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 CSRNP1Q96S65 589 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 GBA2Q9HCG7 927 aaPredicted RBP10.85□□□□□ -0.67
HMG20A-209ENST00000559728 DIAPH3Q9NSV4 1193 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 ZNF112Q9UJU3 913 aa10.85□□□□□ -0.67
HMG20A-209ENST00000559728 ECM29Q5VYK3 1845 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 USP17L21D6R901 530 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 TBC1D12O60347 775 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 GNAT2P19087 354 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 PTH1RQ03431 593 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 ALX1Q15699 326 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 SBK1Q52WX2 424 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 GIMAP6Q6P9H5 292 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 SAPCD2Q86UD0 394 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.84□□□□□ -0.67
HMG20A-209ENST00000559728 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 ESYT1Q9BSJ8 1104 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 EHD4Q9H223 541 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 DHX36Q9H2U1 1008 aaKnown RBP10.84□□□□□ -0.67
HMG20A-209ENST00000559728 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 MCM9Q9NXL9 1143 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 TLL2Q9Y6L7 1015 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 RAD50Q92878 1312 aa10.84□□□□□ -0.67
HMG20A-209ENST00000559728 TMEM88BA6NKF7 163 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 UBE2Q2LH0YL09 131 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 CDC45O75419 566 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 FGAP02671 866 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 PRKG1Q13976 671 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
HMG20A-209ENST00000559728 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.83□□□□□ -0.68
HMG20A-209ENST00000559728 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 LSG1Q9H089 658 aaKnown RBP10.83□□□□□ -0.68
HMG20A-209ENST00000559728 PI4KBQ9UBF8 816 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 SIPA1L1O43166 1804 aa10.83□□□□□ -0.68
HMG20A-209ENST00000559728 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 HSPA6P17066 643 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 INPP5BP32019 993 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 SHMT1P34896 483 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 ATN1P54259 1190 aaPredicted RBP10.82□□□□□ -0.68
HMG20A-209ENST00000559728 FKBP1BP68106 108 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 TATDN1Q6P1N9 297 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 FOXP4Q8IVH2 680 aaPredicted RBP10.82□□□□□ -0.68
HMG20A-209ENST00000559728 ZSCAN29Q8IWY8 852 aaPredicted RBP10.82□□□□□ -0.68
HMG20A-209ENST00000559728 SLC44A5Q8NCS7 719 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 DSCC1Q9BVC3 393 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 ANGEL1Q9UNK9 670 aaKnown RBP10.82□□□□□ -0.68
HMG20A-209ENST00000559728 SNCAIPQ9Y6H5 919 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 TAF6LQ9Y6J9 622 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 PAPPA2Q9BXP8 1791 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 ZMYM6O95789 1325 aa10.82□□□□□ -0.68
HMG20A-209ENST00000559728 POLR2AP24928 1970 aaKnown RBP10.81□□□□□ -0.68
HMG20A-209ENST00000559728 ATMINO43313 823 aaPredicted RBP10.81□□□□□ -0.68
HMG20A-209ENST00000559728 GJA5P36382 358 aa10.81□□□□□ -0.68
HMG20A-209ENST00000559728 C16orf86Q6ZW13 317 aa10.81□□□□□ -0.68
HMG20A-209ENST00000559728 TTC6Q86TZ1 520 aa10.81□□□□□ -0.68
HMG20A-209ENST00000559728 MAP4K1Q92918 833 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms