RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 DDX20Q9UHI6 824 aaKnown RBP12.19□□□□□ -0.46
SMAD3-211ENST00000559460 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 DOCK2Q92608 1830 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 MYBBP1AQ9BQG0 1328 aaKnown RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 ENTPD3O75355 529 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 IFIT1P09914 478 aaKnown RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 RGS3P49796 1198 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 SPP2Q13103 211 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 DIXDC1Q155Q3 683 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 AKNAD1Q5T1N1 836 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 G2E3Q7L622 706 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 CCDC84Q86UT8 332 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 ALYREFQ86V81 257 aaKnown RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 ZNF280CQ8ND82 737 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 TIFAQ96CG3 184 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 SNX27Q96L92 541 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 AS3MTQ9HBK9 375 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 C9orf78Q9NZ63 289 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-211ENST00000559460 DOCK1Q14185 1865 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
SMAD3-211ENST00000559460 GLRX3O76003 335 aaKnown RBP12.17□□□□□ -0.46
SMAD3-211ENST00000559460 LDHBP07195 334 aaKnown RBP12.17□□□□□ -0.46
SMAD3-211ENST00000559460 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-211ENST00000559460 CCL14Q16627 93 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 AAK1Q2M2I8 961 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
SMAD3-211ENST00000559460 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 CCDC129Q6ZRS4 1044 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
SMAD3-211ENST00000559460 TMOD4Q9NZQ9 345 aa12.17□□□□□ -0.46
SMAD3-211ENST00000559460 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-211ENST00000559460 PTPRFP10586 1907 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 IGFBP4P22692 258 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 PICALMQ13492 652 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 RALBP1Q15311 655 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 TRIM60Q495X7 471 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 SLC39A5Q6ZMH5 540 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 GPR142Q7Z601 462 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 PLEKHH3Q7Z736 793 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 ZFPM1Q8IX07 1006 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 GTF3C2Q8WUA4 911 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-211ENST00000559460 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-211ENST00000559460 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■■□□ 16.3
SMAD3-211ENST00000559460 PDLIM7Q9NR12 457 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
SMAD3-211ENST00000559460 GRM8O00222 908 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 RAG1P15918 1043 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 FPGSQ05932 587 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-211ENST00000559460 EPHA10Q5JZY3 1008 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 GJC2Q5T442 439 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-211ENST00000559460 WDR78Q5VTH9 848 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 IDI2Q9BXS1 227 aa12.15□□□□□ -0.46
SMAD3-211ENST00000559460 PRUNE2Q8WUY3 3088 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 UTYO14607 1347 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 PDE8BO95263 885 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 PRDX5P30044 214 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 HERVK_113P62684 666 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 SLF2Q8IX21 1173 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
SMAD3-211ENST00000559460 PRDM12Q9H4Q4 367 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 TACC3Q9Y6A5 838 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 LOC285556D6RIA3 1793 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
SMAD3-211ENST00000559460 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 SLC5A1P13866 664 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 ERVK-9P63128 1117 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 ERVK-24P63145 666 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 CCNA1P78396 465 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 PUM3Q15397 648 aaKnown RBP12.13□□□□□ -0.47
SMAD3-211ENST00000559460 MORN1Q5T089 497 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
SMAD3-211ENST00000559460 GNL3LQ9NVN8 582 aaKnown RBP12.13□□□□□ -0.47
SMAD3-211ENST00000559460 ADAMTS8Q9UP79 889 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 FRMPD3Q5JV73 1810 aa12.13□□□□□ -0.47
SMAD3-211ENST00000559460 TRIM43BA6NCK2 446 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-211ENST00000559460 CLTBP09497 229 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 MAP3K10Q02779 954 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 MTMR2Q13614 643 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 SKIV2LQ15477 1246 aaKnown RBP12.12□□□□□ -0.47
SMAD3-211ENST00000559460 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 SH3RF1Q7Z6J0 888 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
SMAD3-211ENST00000559460 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 USP6NLQ92738 828 aa12.12□□□□□ -0.47
SMAD3-211ENST00000559460 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms