RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 NBPF12Q5TAG4 269 aaPredicted RBP7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 CREB3L3Q68CJ9 461 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 FOXP4Q8IVH2 680 aaPredicted RBP7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 CDAN1Q8IWY9 1227 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 TEPSINQ96N21 525 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 USP26Q9BXU7 913 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 BACH2Q9BYV9 841 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 RNF41Q9H4P4 317 aaPredicted RBP7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 ZNF408Q9H9D4 720 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 SWAP70Q9UH65 585 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 HERC5Q9UII4 1024 aaKnown RBP7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 ANAPC4Q9UJX5 808 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 TAOK2Q9UL54 1235 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 ROBO3Q96MS0 1386 aa7.83□□□□□ -1.16
CHRNA3-204ENST00000559002 FAM196BA6NMK8 535 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 TRAF5O00463 557 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 PPP1R12BO60237 982 aaPredicted RBP7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 CYP21A2P08686 494 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 HSPA4P34932 840 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 TRDNQ13061 729 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 PRKG1Q13976 671 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 DDX60LQ5H9U9 1706 aaKnown RBP7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 DLK2Q6UY11 383 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 MFSD6Q6ZSS7 791 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 C16orf86Q6ZW13 317 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 MIGA2Q7L4E1 593 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 RALYLQ86SE5 291 aaKnown RBP7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 DYNLL2Q96FJ2 89 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 ZNF341Q9BYN7 854 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
CHRNA3-204ENST00000559002 FOCADQ5VW36 1801 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 MPHOSPH10O00566 681 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 TBC1D12O60347 775 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 PRDM1O75626 825 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 CELF2O95319 508 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 PCP11498 1178 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 IREB2P48200 963 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 CDK8P49336 464 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 EVX2Q03828 476 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 GABPAQ06546 454 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 FSTL1Q12841 308 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 KRT32Q14532 448 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 NECTIN1Q15223 517 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 RRP12Q5JTH9 1297 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 AKNAD1Q5T1N1 836 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 ARMC9Q7Z3E5 817 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 METTL16Q86W50 562 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 TBC1D10CQ8IV04 446 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 ZNF444Q8N0Y2 327 aaPredicted RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 PIAS4Q8N2W9 510 aaPredicted RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 SLC44A5Q8NCS7 719 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 STAG1Q8WVM7 1258 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 ESR2Q92731 530 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 KRT23Q9C075 422 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 CNNM2Q9H8M5 875 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 ANGEL1Q9UNK9 670 aaKnown RBP7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 CDK5RAP2Q96SN8 1893 aa7.81□□□□□ -1.16
CHRNA3-204ENST00000559002 NEDD4P46934 1319 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 SSC5DA1L4H1 1573 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 MYH1P12882 1939 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 LAMB1P07942 1786 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 TSPY2A6NKD2 308 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 E7EWF7 191 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 SMIM22K7EJ46 135 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 ORC4O43929 436 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 RANBP6O60518 1105 aaKnown RBP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 GDF11O95390 407 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 ITGBL1O95965 494 aaPredicted RBP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 TSPY3P0CV98 308 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 TSPY8P0CW00 308 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 SLURP2P0DP57 97 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 PSMA5P28066 241 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 SHMT1P34896 483 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 NT5C2P49902 561 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 FKBP1BP68106 108 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 FMR1Q06787 632 aaKnown RBP eCLIP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 CERKLQ49MI3 558 aaPredicted RBP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 C2orf69Q8N8R5 385 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 NCOA7Q8NI08 942 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 CCDC17Q96LX7 622 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 WRNIP1Q96S55 665 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 C22orf23Q9BZE7 217 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 NBPF3Q9H094 633 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 DNAJC18Q9H819 358 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 GBA2Q9HCG7 927 aaPredicted RBP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 CABP5Q9NP86 173 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 FZD1Q9UP38 647 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 SNX14Q9Y5W7 946 aa7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 BAZ2AQ9UIF9 1905 aaKnown RBP7.8□□□□□ -1.16
CHRNA3-204ENST00000559002 PASKQ96RG2 1323 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 B4E1Z4 1266 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 CTNND1O60716 968 aaKnown RBP7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 KDM4AO75164 1064 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 USP2O75604 605 aaPredicted RBP7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 FGRP09769 529 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 RASA1P20936 1047 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 INPP5BP32019 993 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms