RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 AKAP4Q5JQC9 854 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 DUSP27Q5VZP5 1158 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 DYMQ7RTS9 669 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 ZAR1Q86SH2 424 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 VSIG10LQ86VR7 867 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 GAL3ST3Q96A11 431 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 GMLQ99445 158 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 EMILIN2Q9BXX0 1053 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 LRRC4CQ9HCJ2 640 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 PRKAG2Q9UGJ0 569 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 PPP1R9AQ9ULJ8 1098 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 ACTL7BQ9Y614 415 aa6.83□□□□□ -1.32
CASC4-206ENST00000558847 SHROOM4Q9ULL8 1493 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 FAM170BA6NMN3 283 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 LMNB1P20700 586 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 RPS26P62854 115 aaKnown RBP6.82□□□□□ -1.32
CASC4-206ENST00000558847 MAP7Q14244 749 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 MAP1SQ66K74 1059 aaPredicted RBP6.82□□□□□ -1.32
CASC4-206ENST00000558847 LLGL2Q6P1M3 1020 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 KIAA0825Q8IV33 1275 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 GPBAR1Q8TDU6 330 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 KCNB2Q92953 911 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 TMEM74Q96NL1 305 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 BSDC1Q9NW68 430 aaPredicted RBP6.82□□□□□ -1.32
CASC4-206ENST00000558847 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 PCDHGB7Q9Y5F8 929 aa6.82□□□□□ -1.32
CASC4-206ENST00000558847 TRIM37O94972 964 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 NFICP08651 508 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 GBP2P32456 591 aaPredicted RBP6.81□□□□□ -1.32
CASC4-206ENST00000558847 GJA8P48165 433 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 LIG3P49916 1009 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 RACK1P63244 317 aaKnown RBP6.81□□□□□ -1.32
CASC4-206ENST00000558847 SCARA3Q6AZY7 606 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 TTBK2Q6IQ55 1244 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 FLCNQ8NFG4 579 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 GPRASP2Q96D09 838 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 SPON2Q9BUD6 331 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 CBX8Q9HC52 389 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 KBTBD4Q9NVX7 518 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 CRIM1Q9NZV1 1036 aa6.81□□□□□ -1.32
CASC4-206ENST00000558847 HNRNPUQ00839 825 aaKnown RBP eCLIP6.8□□□□□ -1.32
CASC4-206ENST00000558847 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
CASC4-206ENST00000558847 ID3Q02535 119 aa6.8□□□□□ -1.32
CASC4-206ENST00000558847 SOGA3Q5TF21 947 aa6.8□□□□□ -1.32
CASC4-206ENST00000558847 EZH1Q92800 747 aaPredicted RBP6.8□□□□□ -1.32
CASC4-206ENST00000558847 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
CASC4-206ENST00000558847 CYP8B1Q9UNU6 501 aa6.8□□□□□ -1.32
CASC4-206ENST00000558847 PRNPP04156 253 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 EIF4A3P38919 411 aaKnown RBP6.79□□□□□ -1.32
CASC4-206ENST00000558847 ASPAP45381 313 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 PTPN11Q06124 597 aaPredicted RBP6.79□□□□□ -1.32
CASC4-206ENST00000558847 COL9A2Q14055 689 aaPredicted RBP6.79□□□□□ -1.32
CASC4-206ENST00000558847 LRRC14Q15048 493 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 ZC3H12AQ5D1E8 599 aaKnown RBP6.79□□□□□ -1.32
CASC4-206ENST00000558847 AGMOQ6ZNB7 445 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 CCDC84Q86UT8 332 aaPredicted RBP6.79□□□□□ -1.32
CASC4-206ENST00000558847 RASGRP4Q8TDF6 673 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 ACSS3Q9H6R3 686 aa6.79□□□□□ -1.32
CASC4-206ENST00000558847 SUPT16HQ9Y5B9 1047 aaKnown RBP6.79□□□□□ -1.32
CASC4-206ENST00000558847 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
CASC4-206ENST00000558847 PAK2Q13177 524 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 MAP3K11Q16584 847 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 ZNF765Q7L2R6 523 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 AGBL5Q8NDL9 886 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 PHC3Q8NDX5 983 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 ASIC4Q96FT7 647 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 SEMA6CQ9H3T2 930 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 LGR6Q9HBX8 967 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 COPRSQ9NQ92 184 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 KCNQ5Q9NR82 932 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 DISC1Q9NRI5 854 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 DAGLAQ9Y4D2 1042 aa6.78□□□□□ -1.32
CASC4-206ENST00000558847 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.77□□□□□ -1.33
CASC4-206ENST00000558847 NEFMP07197 916 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 TFE3P19532 575 aaPredicted RBP6.77□□□□□ -1.33
CASC4-206ENST00000558847 NTF4P34130 210 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 TNNI2P48788 182 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 LMNB2Q03252 620 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 SNAP47Q5SQN1 464 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 ACSBG1Q96GR2 724 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 RHOVQ96L33 236 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 HIRIP3Q9BW71 556 aaPredicted RBP6.77□□□□□ -1.33
CASC4-206ENST00000558847 ZC3H7BQ9UGR2 993 aaKnown RBP6.77□□□□□ -1.33
CASC4-206ENST00000558847 PCDHB5Q9Y5E4 795 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 ROBO2Q9HCK4 1378 aa6.77□□□□□ -1.33
CASC4-206ENST00000558847 MINDY4BA8MYZ0 360 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 SLFN14P0C7P3 912 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 ERVK-24P63145 666 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 FZD5Q13467 585 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 SEPT6Q14141 434 aa6.76□□□□□ -1.33
CASC4-206ENST00000558847 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
CASC4-206ENST00000558847 ZNF296Q8WUU4 475 aaPredicted RBP6.76□□□□□ -1.33
CASC4-206ENST00000558847 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms