RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TRIB2Q92519 343 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 CDX2Q99626 313 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-207ENST00000558500 USP40Q9NVE5 1235 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 PCDHB8Q9UN66 801 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 KIF16BQ96L93 1317 aa8.51□□□□□ -1.05
LRRC28-207ENST00000558500 A0A1B0GUL6 1792 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 CTNND1O60716 968 aaKnown RBP8.5□□□□□ -1.05
LRRC28-207ENST00000558500 PDE8BO95263 885 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 COL9A1P20849 921 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 GCLCP48506 637 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-207ENST00000558500 MAP3K10Q02779 954 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 LRRC26Q2I0M4 334 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 LRRC24Q50LG9 513 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 TREML2Q5T2D2 321 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 ASTLQ6HA08 431 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-207ENST00000558500 WDR66Q8TBY9 1149 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
LRRC28-207ENST00000558500 KAZALD1Q96I82 304 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 SUCLG2Q96I99 432 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 C9orf78Q9NZ63 289 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-207ENST00000558500 TRPC6Q9Y210 931 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
LRRC28-207ENST00000558500 ALPK3Q96L96 1907 aa8.5□□□□□ -1.05
LRRC28-207ENST00000558500 ENTPD3O75355 529 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 ALDH1L1O75891 902 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 IFIT1P09914 478 aaKnown RBP8.49□□□□□ -1.05
LRRC28-207ENST00000558500 FGFR2P21802 821 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 ZEB1P37275 1124 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-207ENST00000558500 RGS3P49796 1198 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 CCDC84Q86UT8 332 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-207ENST00000558500 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-207ENST00000558500 IDI2Q9BXS1 227 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 SEMA6BQ9H3T3 888 aa8.49□□□□□ -1.05
LRRC28-207ENST00000558500 BMP2KQ9NSY1 1161 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-207ENST00000558500 ATMINO43313 823 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 VAMP4O75379 141 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 SLURP2P0DP57 97 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 CYP2B6P20813 491 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 PRDX5P30044 214 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 PUM3Q15397 648 aaKnown RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 CCDC27Q2M243 656 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 RABL6Q3YEC7 729 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 LHX8Q68G74 356 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 WWC1Q8IX03 1113 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 ASCC2Q9H1I8 757 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 BICC1Q9H694 974 aaKnown RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-207ENST00000558500 MORF4L1Q9UBU8 362 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 IL16Q14005 1332 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 RFX7Q2KHR2 1363 aa8.48□□□□□ -1.05
LRRC28-207ENST00000558500 DDTLA6NHG4 134 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 STK25O00506 426 aa8.47□□□□□ -1.05
LRRC28-207ENST00000558500 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 NBPF7P0C2Y1 421 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 XRCC5P13010 732 aaKnown RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 PABPC4Q13310 644 aaKnown RBP eCLIP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 ZSCAN29Q8IWY8 852 aaPredicted RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 TRMT44Q8IYL2 757 aaKnown RBP8.47□□□□□ -1.05
LRRC28-207ENST00000558500 MYLIPQ8WY64 445 aa8.47□□□□□ -1.05
LRRC28-207ENST00000558500 UTYO14607 1347 aa8.47□□□□□ -1.05
LRRC28-207ENST00000558500 FANCIQ9NVI1 1328 aa8.47□□□□□ -1.05
LRRC28-207ENST00000558500 DDX60LQ5H9U9 1706 aaKnown RBP8.46□□□□□ -1.05
LRRC28-207ENST00000558500 TTLL13PA6NNM8 815 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 SLC5A1P13866 664 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 FOSL2P15408 326 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 ZKSCAN1P17029 563 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-207ENST00000558500 CCND3P30281 292 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-207ENST00000558500 HMGCS2P54868 508 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 SPP2Q13103 211 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 DDX10Q13206 875 aaKnown RBP8.46□□□□□ -1.06
LRRC28-207ENST00000558500 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 ANKRD44Q8N8A2 993 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 ZNF280CQ8ND82 737 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 KLHDC4Q8TBB5 520 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 SOCS4Q8WXH5 440 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 LPIN2Q92539 896 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 USP6NLQ92738 828 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 TTYH1Q9H313 450 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-207ENST00000558500 DDX4Q9NQI0 724 aaKnown RBP8.46□□□□□ -1.06
LRRC28-207ENST00000558500 RAPGEFL1Q9UHV5 662 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 MGAMO43451 1857 aa8.46□□□□□ -1.06
LRRC28-207ENST00000558500 TNFRSF10AO00220 468 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 TBC1D12O60347 775 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
LRRC28-207ENST00000558500 PDAP1Q13442 181 aaKnown RBP8.45□□□□□ -1.06
LRRC28-207ENST00000558500 SHHQ15465 462 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 TJAP1Q5JTD0 557 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 SENP6Q9GZR1 1112 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-207ENST00000558500 OSBPL5Q9H0X9 879 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-207ENST00000558500 PRKAG2Q9UGJ0 569 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 GAKO14976 1311 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 SALL1Q9NSC2 1324 aa8.45□□□□□ -1.06
LRRC28-207ENST00000558500 FAM196BA6NMK8 535 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms