RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
VPS18-202ENST00000558474 ESR2Q92731 530 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 TTC14Q96N46 770 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 PI4KBQ9UBF8 816 aa17.59■□□□□ 0.41
VPS18-202ENST00000558474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
VPS18-202ENST00000558474 SHTN1A0MZ66 631 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 EPS15P42566 896 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 PLCD1P51178 756 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 GABPAQ06546 454 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 TBC1D10BQ4KMP7 808 aaPredicted RBP17.58■□□□□ 0.4
VPS18-202ENST00000558474 APOBEC3FQ8IUX4 373 aaKnown RBP17.58■□□□□ 0.4
VPS18-202ENST00000558474 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
VPS18-202ENST00000558474 PDRG1Q9NUG6 133 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 SAP30BPQ9UHR5 308 aaKnown RBP17.58■□□□□ 0.4
VPS18-202ENST00000558474 SERPINB13Q9UIV8 391 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 HACL1Q9UJ83 578 aa17.58■□□□□ 0.4
VPS18-202ENST00000558474 MYH8P13535 1937 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 NEDD4P46934 1319 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 CYP2D7A0A087X1C5 515 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 CLRN2A0PK11 232 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 CYP2D6P10635 497 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 CACNB3P54284 484 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 RBM26Q5T8P6 1007 aaKnown RBP17.57■□□□□ 0.4
VPS18-202ENST00000558474 TMEM87BQ96K49 555 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 PPP2R3BQ9Y5P8 575 aa17.57■□□□□ 0.4
VPS18-202ENST00000558474 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 CNTNAP1P78357 1384 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 TCP10L2B9ZVM9 353 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 EGFRP00533 1210 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 CCDC178Q5BJE1 867 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 HSCBQ8IWL3 235 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 ZC3H15Q8WU90 426 aaKnown RBP17.56■□□□□ 0.4
VPS18-202ENST00000558474 MKNK2Q9HBH9 465 aa17.56■□□□□ 0.4
VPS18-202ENST00000558474 HERC5Q9UII4 1024 aaKnown RBP17.56■□□□□ 0.4
VPS18-202ENST00000558474 B4E1Z4 1266 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 TBC1D12O60347 775 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 CDK8P49336 464 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 TCP10Q12799 353 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
VPS18-202ENST00000558474 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
VPS18-202ENST00000558474 ZSCAN29Q8IWY8 852 aaPredicted RBP17.55■□□□□ 0.4
VPS18-202ENST00000558474 ZFPM1Q8IX07 1006 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 TRPM4Q8TD43 1214 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 HOOK2Q96ED9 719 aa17.55■□□□□ 0.4
VPS18-202ENST00000558474 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
VPS18-202ENST00000558474 PRC1O43663 620 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 KDM4AO75164 1064 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 EPHX2P34913 555 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 MAP3K10Q02779 954 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 SH3BP5LQ7L8J4 393 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 IQCA1Q86XH1 822 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 ZNF444Q8N0Y2 327 aaPredicted RBP17.54■□□□□ 0.4
VPS18-202ENST00000558474 TMTC2Q8N394 836 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 TOMM22Q9NS69 142 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 ZSWIM5Q9P217 1185 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 TACC3Q9Y6A5 838 aa17.54■□□□□ 0.4
VPS18-202ENST00000558474 LIFRP42702 1097 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 HIRAP54198 1017 aaPredicted RBP17.53■□□□□ 0.4
VPS18-202ENST00000558474 RASA3Q14644 834 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
VPS18-202ENST00000558474 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
VPS18-202ENST00000558474 CCDC17Q96LX7 622 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 CSRNP1Q96S65 589 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 TCP11L1Q9NUJ3 509 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 PLIN4Q96Q06 1357 aa17.53■□□□□ 0.4
VPS18-202ENST00000558474 ERICH2A1L162 156 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 K7ELQ4 463 aaPredicted RBP17.52■□□□□ 0.4
VPS18-202ENST00000558474 RANBP6O60518 1105 aaKnown RBP17.52■□□□□ 0.4
VPS18-202ENST00000558474 CPA1P15085 419 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 RASA1P20936 1047 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 AK2P54819 239 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 EVCP57679 992 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 ANTXR2P58335 489 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 FGD1P98174 961 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.4
VPS18-202ENST00000558474 PPP4R3BQ5MIZ7 849 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 ANGEL2Q5VTE6 544 aaKnown RBP17.52■□□□□ 0.4
VPS18-202ENST00000558474 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 Q6ZUG5 572 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 DYNLL2Q96FJ2 89 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 IPO9Q96P70 1041 aaKnown RBP17.52■□□□□ 0.4
VPS18-202ENST00000558474 TBC1D2Q9BYX2 928 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 DEFB129Q9H1M3 183 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 ANGEL1Q9UNK9 670 aaKnown RBP17.52■□□□□ 0.4
VPS18-202ENST00000558474 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
VPS18-202ENST00000558474 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.39
VPS18-202ENST00000558474 TSPY2A6NKD2 308 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 EVX2Q03828 476 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
VPS18-202ENST00000558474 CYB5R4Q7L1T6 521 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 NEDD1Q8NHV4 660 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 IGDCC4Q8TDY8 1250 aa17.51■□□□□ 0.39
VPS18-202ENST00000558474 DCPSQ96C86 337 aaKnown RBP17.51■□□□□ 0.39
VPS18-202ENST00000558474 TEPSINQ96N21 525 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms