RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 PBXIP1Q96AQ6 731 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-211ENST00000558440 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 JPH1Q9HDC5 661 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-211ENST00000558440 CXXC1Q9P0U4 656 aaPredicted RBP8.42□□□□□ -1.06
ZEB1-211ENST00000558440 RTCBQ9Y3I0 505 aaKnown RBP8.42□□□□□ -1.06
ZEB1-211ENST00000558440 PCDH11XQ9BZA7 1347 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 PCDH11YQ9BZA8 1340 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 PALLDQ8WX93 1383 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 NSD3Q9BZ95 1437 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 PKD1L3Q7Z443 1732 aa8.42□□□□□ -1.06
ZEB1-211ENST00000558440 KIF13BQ9NQT8 1826 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 N4BP2Q86UW6 1770 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-211ENST00000558440 IGSF1Q8N6C5 1336 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 FBLN1P23142 703 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 TRIM28Q13263 835 aaKnown RBP8.41□□□□□ -1.06
ZEB1-211ENST00000558440 PCSK7Q16549 785 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 NBPF6Q5VWK0 638 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 PSAPL1Q6NUJ1 521 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 DHX32Q7L7V1 743 aaKnown RBP8.41□□□□□ -1.06
ZEB1-211ENST00000558440 USHBP1Q8N6Y0 703 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 NBPF4Q96M43 638 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
ZEB1-211ENST00000558440 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
ZEB1-211ENST00000558440 SASH3O75995 380 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 EGFRP00533 1210 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 RARAP10276 462 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 TARSP26639 723 aaKnown RBP8.4□□□□□ -1.06
ZEB1-211ENST00000558440 GATA4P43694 442 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 RRS1Q15050 365 aaKnown RBP8.4□□□□□ -1.06
ZEB1-211ENST00000558440 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 C16orf46Q6P387 395 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 TRPM4Q8TD43 1214 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 SMARCC1Q92922 1105 aaPredicted RBP8.4□□□□□ -1.06
ZEB1-211ENST00000558440 CLP1Q92989 425 aaKnown RBP8.4□□□□□ -1.06
ZEB1-211ENST00000558440 SAP130Q9H0E3 1048 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 USP20Q9Y2K6 914 aa8.4□□□□□ -1.06
ZEB1-211ENST00000558440 AFF1P51825 1210 aaKnown RBP8.39□□□□□ -1.07
ZEB1-211ENST00000558440 GPLD1P80108 840 aa8.39□□□□□ -1.07
ZEB1-211ENST00000558440 FAM35AQ86V20 835 aa8.39□□□□□ -1.07
ZEB1-211ENST00000558440 RGL4Q8IZJ4 473 aa8.39□□□□□ -1.07
ZEB1-211ENST00000558440 NACC1Q96RE7 527 aa8.39□□□□□ -1.07
ZEB1-211ENST00000558440 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
ZEB1-211ENST00000558440 CICQ96RK0 1608 aaPredicted RBP8.39□□□□□ -1.07
ZEB1-211ENST00000558440 BRCA1P38398 1863 aaKnown RBP8.38□□□□□ -1.07
ZEB1-211ENST00000558440 TONSLQ96HA7 1378 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 ZBTB42B2RXF5 422 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 PTCD1O75127 700 aaKnown RBP8.38□□□□□ -1.07
ZEB1-211ENST00000558440 RGS9O75916 674 aaPredicted RBP8.38□□□□□ -1.07
ZEB1-211ENST00000558440 CPB1P15086 417 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 ETFBKMTQ8IXQ9 262 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 LPIN3Q9BQK8 851 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
ZEB1-211ENST00000558440 WDR90Q96KV7 1748 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 INSRP06213 1382 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 FLT4P35916 1363 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 XYLBO75191 536 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 BRD2P25440 801 aaKnown RBP8.37□□□□□ -1.07
ZEB1-211ENST00000558440 SSFA2P28290 1259 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 DOC2BQ14184 412 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 GRIK4Q16099 956 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 CAPN12Q6ZSI9 719 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
ZEB1-211ENST00000558440 GGNBP2Q9H3C7 697 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 KCNMB2Q9Y691 235 aa8.37□□□□□ -1.07
ZEB1-211ENST00000558440 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 FYB1O15117 783 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 CYP27B1O15528 508 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 ELNP15502 786 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
ZEB1-211ENST00000558440 NRLP54845 237 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 HSP90AB2PQ58FF8 381 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 FAM26DQ5JW98 314 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 PERM1Q5SV97 790 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 AMIGO3Q86WK7 504 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 TESK2Q96S53 571 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 TLR7Q9NYK1 1049 aaKnown RBP8.36□□□□□ -1.07
ZEB1-211ENST00000558440 ANKRD26Q9UPS8 1709 aa8.36□□□□□ -1.07
ZEB1-211ENST00000558440 KIF24Q5T7B8 1368 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 SIK1P57059 783 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 RAC1P63000 192 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 MLLT1Q03111 559 aaPredicted RBP8.35□□□□□ -1.07
ZEB1-211ENST00000558440 GRIK5Q16478 980 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 SMIM5Q71RC9 77 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 PIGBQ92521 554 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 TTC9Q92623 222 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 TMOD3Q9NYL9 352 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
ZEB1-211ENST00000558440 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
ZEB1-211ENST00000558440 COL5A3P25940 1745 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms