RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 COPRSQ9NQ92 184 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
PCAT29-201ENST00000558411 GGCXP38435 758 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 FNTAP49354 379 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 PLCD1P51178 756 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 NBPF14Q5TI25 921 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 TRAPPC11Q7Z392 1133 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 BCAS4Q8TDM0 211 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 CTAGE1Q96RT6 745 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.38
PCAT29-201ENST00000558411 USP54Q70EL1 1684 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 FER1L4A9Z1Z3 1794 aa12.71□□□□□ -0.38
PCAT29-201ENST00000558411 A0A0U1RQJ8 604 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 TMCO5BA8MYB1 307 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 GOLGA8KD6RF30 607 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 AGPSO00116 658 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 SEMA3EO15041 775 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 ARHGAP25P42331 645 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 CKAP4Q07065 602 aaKnown RBP12.7□□□□□ -0.38
PCAT29-201ENST00000558411 NEDD9Q14511 834 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 POSTNQ15063 836 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 APTXQ7Z2E3 356 aaKnown RBP12.7□□□□□ -0.38
PCAT29-201ENST00000558411 GIMAP7Q8NHV1 300 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 RUBCNQ92622 972 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 PAGR1Q9BTK6 254 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 WDR19Q8NEZ3 1342 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 CHUKO15111 745 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
PCAT29-201ENST00000558411 ANXA1P04083 346 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
PCAT29-201ENST00000558411 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
PCAT29-201ENST00000558411 ZMYM1Q5SVZ6 1142 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 YTHDF3Q7Z739 585 aaKnown RBP12.7□□□□□ -0.38
PCAT29-201ENST00000558411 SH3GL2Q99962 352 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
PCAT29-201ENST00000558411 PSMD14O00487 310 aa12.69□□□□□ -0.38
PCAT29-201ENST00000558411 CPLX1O14810 134 aa12.69□□□□□ -0.38
PCAT29-201ENST00000558411 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
PCAT29-201ENST00000558411 SKOR1P84550 965 aa12.69□□□□□ -0.38
PCAT29-201ENST00000558411 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
PCAT29-201ENST00000558411 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
PCAT29-201ENST00000558411 CCDC189A1A4V9 331 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 KIAA0754O94854 1291 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 EPB41P11171 864 aaKnown RBP12.68□□□□□ -0.38
PCAT29-201ENST00000558411 HOXC9P31274 260 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 FILIP1LQ4L180 1135 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 NCAPH2Q6IBW4 605 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 KANK3Q6NY19 840 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 SELENOOQ9BVL4 669 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
PCAT29-201ENST00000558411 MCM8Q9UJA3 840 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 CAPN7Q9Y6W3 813 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 GOLGA8BA8MQT2 603 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 OPA1O60313 960 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 ZEB2O60315 1214 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 PLCB4Q15147 1175 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 PREPLQ4J6C6 727 aaPredicted RBP12.68□□□□□ -0.38
PCAT29-201ENST00000558411 SPATA1Q5VX52 437 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 CCNI2Q6ZMN8 369 aaPredicted RBP12.68□□□□□ -0.38
PCAT29-201ENST00000558411 MICALCLQ6ZW33 695 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
PCAT29-201ENST00000558411 VPS37DQ86XT2 251 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 KRI1Q8N9T8 703 aaKnown RBP12.68□□□□□ -0.38
PCAT29-201ENST00000558411 MED15Q96RN5 788 aa12.68□□□□□ -0.38
PCAT29-201ENST00000558411 ROBO2Q9HCK4 1378 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 HEG1Q9ULI3 1381 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 ZMYM6O95789 1325 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 KLF18A0A0U1RQI7 1052 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 MEFVO15553 781 aaPredicted RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 TEX33O43247 280 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 TFRCP02786 760 aaKnown RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 CHGBP05060 677 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 ELF1P32519 619 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 RDXP35241 583 aaKnown RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 GNGT1P63211 74 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 TRIM14Q14142 442 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 CHST3Q7LGC8 479 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 TRMT44Q8IYL2 757 aaKnown RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 OTUD6BQ8N6M0 293 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 ACRBPQ8NEB7 543 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 SPATA20Q8TB22 786 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 JPH2Q9BR39 696 aaPredicted RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 CDKL5O76039 1030 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 GYPCP04921 128 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms