RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CRNKL1Q9BZJ0 848 aaKnown RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.25□□□□□ -0.77
TPM1-213ENST00000558400 PICK1Q9NRD5 415 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
TPM1-213ENST00000558400 TAOK2Q9UL54 1235 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 NDUFB9Q9Y6M9 179 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 SSC5DA1L4H1 1573 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 MYH2Q9UKX2 1941 aa10.25□□□□□ -0.77
TPM1-213ENST00000558400 PHF20L1A8MW92 1017 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 CXCL11O14625 94 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 HLA-DOAP06340 250 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 ZFYP08048 801 aaPredicted RBP10.24□□□□□ -0.77
TPM1-213ENST00000558400 CETPP11597 493 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 INPP5BP32019 993 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 ADD2P35612 726 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 PPIL2Q13356 520 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 SNAPC2Q13487 334 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 ADGRA1Q86SQ6 560 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 TICAM2Q86XR7 235 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 IFNL1Q8IU54 200 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 SMC5Q8IY18 1101 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 MIGA1Q8NAN2 632 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 ZNF532Q9HCE3 1301 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
TPM1-213ENST00000558400 COL2A1P02458 1487 aaPredicted RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 TCRBV5S4A2TA0A5A2 114 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 MX1P20591 662 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 DYNLL1P63167 89 aaKnown RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 METTL16Q86W50 562 aaKnown RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 MAPKAPK5Q8IW41 473 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 SCYL3Q8IZE3 742 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 CRACR2BQ8N4Y2 399 aaPredicted RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 KBTBD3Q8NAB2 608 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 OTUD5Q96G74 571 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 RIOK1Q9BRS2 568 aaKnown RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 ZCCHC17Q9NP64 241 aaKnown RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 SNCAIPQ9Y6H5 919 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 FLT1P17948 1338 aa10.23□□□□□ -0.77
TPM1-213ENST00000558400 RBBP6Q7Z6E9 1792 aaKnown RBP10.23□□□□□ -0.77
TPM1-213ENST00000558400 CCL15-CCL14A0A0B4J2E2 113 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 IRF6O14896 467 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 GJA5P36382 358 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 CCL15Q16663 113 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
TPM1-213ENST00000558400 EDC3Q96F86 508 aaKnown RBP10.22□□□□□ -0.77
TPM1-213ENST00000558400 ATP8A2Q9NTI2 1148 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 PALD1Q9ULE6 856 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 KCNH4Q9UQ05 1017 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 ZHX2Q9Y6X8 837 aa10.22□□□□□ -0.77
TPM1-213ENST00000558400 RNF113AO15541 343 aaKnown RBP10.21□□□□□ -0.77
TPM1-213ENST00000558400 IGHDP01880 384 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 POLR3DP05423 398 aaPredicted RBP10.21□□□□□ -0.77
TPM1-213ENST00000558400 ASNSP08243 561 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 PTPRAP18433 802 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 CAP2P40123 477 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 PDE1AP54750 535 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 CTU1Q7Z7A3 348 aaKnown RBP10.21□□□□□ -0.77
TPM1-213ENST00000558400 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 PI4K2BQ8TCG2 481 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 EHD4Q9H223 541 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 SERPINB13Q9UIV8 391 aa10.21□□□□□ -0.77
TPM1-213ENST00000558400 AK9Q5TCS8 1911 aa10.21□□□□□ -0.78
TPM1-213ENST00000558400 USP17L5A8MUK1 530 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 GPR25O00155 361 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 TBC1D8O95759 1140 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 GNAT2P19087 354 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 FXR1P51114 621 aaKnown RBP eCLIP10.2□□□□□ -0.78
TPM1-213ENST00000558400 NUCB1Q02818 461 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 ARHGEF6Q15052 776 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 CHD1LQ86WJ1 897 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 BRI3BPQ8WY22 251 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 APPBP2Q92624 585 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 EVI5LQ96CN4 794 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 PTPN18Q99952 460 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 AS3MTQ9HBK9 375 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 DCP1AQ9NPI6 582 aaPredicted RBP10.2□□□□□ -0.78
TPM1-213ENST00000558400 MCM9Q9NXL9 1143 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 AFG3L2Q9Y4W6 797 aa10.2□□□□□ -0.78
TPM1-213ENST00000558400 IGF2BP3O00425 579 aaKnown RBP eCLIP10.19□□□□□ -0.78
TPM1-213ENST00000558400 FKTNO75072 461 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 MBD4O95243 580 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 PKN2Q16513 984 aaKnown RBP10.19□□□□□ -0.78
TPM1-213ENST00000558400 B4GALNT3Q6L9W6 998 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 GIMAP6Q6P9H5 292 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 ANKRD23Q86SG2 305 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 ZNF280CQ8ND82 737 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 LNPKQ9C0E8 428 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 ARMT1Q9H993 441 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 CABP5Q9NP86 173 aa10.19□□□□□ -0.78
TPM1-213ENST00000558400 SAP30BPQ9UHR5 308 aaKnown RBP10.19□□□□□ -0.78
TPM1-213ENST00000558400 SALL3Q9BXA9 1300 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms