RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 FCGRTP55899 365 aa19.02■□□□□ 0.64
TPM1-211ENST00000558314 SPP2Q13103 211 aa19.02■□□□□ 0.64
TPM1-211ENST00000558314 PIH1D3Q9NQM4 214 aaKnown RBP19.02■□□□□ 0.64
TPM1-211ENST00000558314 EXOC6BQ9Y2D4 811 aa19.02■□□□□ 0.64
TPM1-211ENST00000558314 IDH1O75874 414 aaKnown RBP19.01■□□□□ 0.63
TPM1-211ENST00000558314 MAP3K10Q02779 954 aa19.01■□□□□ 0.63
TPM1-211ENST00000558314 PRKCZQ05513 592 aa19.01■□□□□ 0.63
TPM1-211ENST00000558314 MTFR1Q15390 333 aa19.01■□□□□ 0.63
TPM1-211ENST00000558314 SAP30BPQ9UHR5 308 aaKnown RBP19.01■□□□□ 0.63
TPM1-211ENST00000558314 DBNLQ9UJU6 430 aaKnown RBP19.01■□□□□ 0.63
TPM1-211ENST00000558314 NDUFB9Q9Y6M9 179 aa19.01■□□□□ 0.63
TPM1-211ENST00000558314 HTTP42858 3142 aa19.01■□□□□ 0.63
TPM1-211ENST00000558314 TBC1D12O60347 775 aa19■□□□□ 0.63
TPM1-211ENST00000558314 MAP4K4O95819 1239 aaPredicted RBP19■□□□□ 0.63
TPM1-211ENST00000558314 BCRP11274 1271 aa19■□□□□ 0.63
TPM1-211ENST00000558314 PLCG2P16885 1265 aa19■□□□□ 0.63
TPM1-211ENST00000558314 GRK4P32298 578 aa19■□□□□ 0.63
TPM1-211ENST00000558314 DYNLL1P63167 89 aaKnown RBP19■□□□□ 0.63
TPM1-211ENST00000558314 TREML2Q5T2D2 321 aa19■□□□□ 0.63
TPM1-211ENST00000558314 CEP85Q6P2H3 762 aa19■□□□□ 0.63
TPM1-211ENST00000558314 ADGRA1Q86SQ6 560 aa19■□□□□ 0.63
TPM1-211ENST00000558314 CRACR2BQ8N4Y2 399 aaPredicted RBP19■□□□□ 0.63
TPM1-211ENST00000558314 EAF2Q96CJ1 260 aaPredicted RBP19■□□□□ 0.63
TPM1-211ENST00000558314 DOCK1Q14185 1865 aa19■□□□□ 0.63
TPM1-211ENST00000558314 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
TPM1-211ENST00000558314 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
TPM1-211ENST00000558314 CYP7A1P22680 504 aa18.99■□□□□ 0.63
TPM1-211ENST00000558314 HMGCS2P54868 508 aa18.99■□□□□ 0.63
TPM1-211ENST00000558314 RRP1BQ14684 758 aaKnown RBP18.99■□□□□ 0.63
TPM1-211ENST00000558314 AACSQ86V21 672 aa18.99■□□□□ 0.63
TPM1-211ENST00000558314 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
TPM1-211ENST00000558314 GABRQQ9UN88 632 aa18.99■□□□□ 0.63
TPM1-211ENST00000558314 AGTPBP1Q9UPW5 1226 aa18.99■□□□□ 0.63
TPM1-211ENST00000558314 NOP58Q9Y2X3 529 aaKnown RBP18.99■□□□□ 0.63
TPM1-211ENST00000558314 TNPO2O14787 897 aaKnown RBP18.98■□□□□ 0.63
TPM1-211ENST00000558314 CAP2P40123 477 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 MIGA1Q8NAN2 632 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 ZNF280CQ8ND82 737 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 IL1RAPL2Q9NP60 686 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 PI4KBQ9UBF8 816 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 PALD1Q9ULE6 856 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 FLT1P17948 1338 aa18.98■□□□□ 0.63
TPM1-211ENST00000558314 USP17L5A8MUK1 530 aa18.97■□□□□ 0.63
TPM1-211ENST00000558314 GDF11O95390 407 aa18.97■□□□□ 0.63
TPM1-211ENST00000558314 DHX36Q9H2U1 1008 aaKnown RBP18.97■□□□□ 0.63
TPM1-211ENST00000558314 AS3MTQ9HBK9 375 aa18.97■□□□□ 0.63
TPM1-211ENST00000558314 HERC5Q9UII4 1024 aaKnown RBP18.97■□□□□ 0.63
TPM1-211ENST00000558314 PNMA3Q9UL41 463 aa18.97■□□□□ 0.63
TPM1-211ENST00000558314 USP5P45974 858 aa18.96■□□□□ 0.63
TPM1-211ENST00000558314 UBXN2AP68543 259 aa18.96■□□□□ 0.63
TPM1-211ENST00000558314 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
TPM1-211ENST00000558314 RNF208Q9H0X6 261 aa18.96■□□□□ 0.63
TPM1-211ENST00000558314 SLC45A1Q9Y2W3 748 aa18.96■□□□□ 0.63
TPM1-211ENST00000558314 CENPFP49454 3210 aa18.96■□□□□ 0.63
TPM1-211ENST00000558314 HLA-DOAP06340 250 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 CCL5P13501 91 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 FLT3LGP49771 235 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 PPP4CP60510 307 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
TPM1-211ENST00000558314 ERC1Q8IUD2 1116 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 ZNF512BQ96KM6 892 aaPredicted RBP18.95■□□□□ 0.62
TPM1-211ENST00000558314 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
TPM1-211ENST00000558314 COL2A1P02458 1487 aaPredicted RBP18.95■□□□□ 0.62
TPM1-211ENST00000558314 MAST2Q6P0Q8 1798 aa18.94■□□□□ 0.62
TPM1-211ENST00000558314 RBBP6Q7Z6E9 1792 aaKnown RBP18.94■□□□□ 0.62
TPM1-211ENST00000558314 ADCY3O60266 1144 aa18.94■□□□□ 0.62
TPM1-211ENST00000558314 ELNP15502 786 aa18.94■□□□□ 0.62
TPM1-211ENST00000558314 PABPC4Q13310 644 aaKnown RBP eCLIP18.94■□□□□ 0.62
TPM1-211ENST00000558314 MTMR2Q13614 643 aa18.94■□□□□ 0.62
TPM1-211ENST00000558314 PROCA1Q8NCQ7 364 aaPredicted RBP18.94■□□□□ 0.62
TPM1-211ENST00000558314 TMOD4Q9NZQ9 345 aa18.94■□□□□ 0.62
TPM1-211ENST00000558314 PHIPQ8WWQ0 1821 aa18.93■□□□□ 0.62
TPM1-211ENST00000558314 MS4A1P11836 297 aa18.93■□□□□ 0.62
TPM1-211ENST00000558314 IRX3P78415 501 aaPredicted RBP18.93■□□□□ 0.62
TPM1-211ENST00000558314 SLAIN1Q8ND83 568 aa18.93■□□□□ 0.62
TPM1-211ENST00000558314 COA7Q96BR5 231 aa18.93■□□□□ 0.62
TPM1-211ENST00000558314 JAG1P78504 1218 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 HSP90AB4PQ58FF6 505 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 FOXP4Q8IVH2 680 aaPredicted RBP18.92■□□□□ 0.62
TPM1-211ENST00000558314 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 DNAJC2Q99543 621 aaKnown RBP18.92■□□□□ 0.62
TPM1-211ENST00000558314 TBC1D2Q9BYX2 928 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 UNC93B1Q9H1C4 597 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 ASCC2Q9H1I8 757 aaPredicted RBP18.92■□□□□ 0.62
TPM1-211ENST00000558314 DNAJC18Q9H819 358 aa18.92■□□□□ 0.62
TPM1-211ENST00000558314 MYO5AQ9Y4I1 1855 aaKnown RBP18.92■□□□□ 0.62
TPM1-211ENST00000558314 ATAD5Q96QE3 1844 aa18.91■□□□□ 0.62
TPM1-211ENST00000558314 ASNSP08243 561 aa18.91■□□□□ 0.62
TPM1-211ENST00000558314 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
TPM1-211ENST00000558314 DPF3Q92784 378 aa18.91■□□□□ 0.62
TPM1-211ENST00000558314 PTPRFP10586 1907 aa18.91■□□□□ 0.62
TPM1-211ENST00000558314 INHAP05111 366 aa18.9■□□□□ 0.62
TPM1-211ENST00000558314 IFIT2P09913 472 aaKnown RBP18.9■□□□□ 0.62
TPM1-211ENST00000558314 CLASRPQ8N2M8 674 aaKnown RBP18.9■□□□□ 0.62
TPM1-211ENST00000558314 NKX2-3Q8TAU0 364 aa18.9■□□□□ 0.62
TPM1-211ENST00000558314 SHISA4Q96DD7 197 aa18.9■□□□□ 0.62
TPM1-211ENST00000558314 ZBTB21Q9ULJ3 1066 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms