RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 ADD2P35612 726 aa16.47■□□□□ 0.23
ALPK3-202ENST00000558077 GTF2A2P52657 109 aa16.47■□□□□ 0.23
ALPK3-202ENST00000558077 AAMPQ13685 434 aa16.47■□□□□ 0.23
ALPK3-202ENST00000558077 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
ALPK3-202ENST00000558077 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
ALPK3-202ENST00000558077 DDX60LQ5H9U9 1706 aaKnown RBP16.47■□□□□ 0.23
ALPK3-202ENST00000558077 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.23
ALPK3-202ENST00000558077 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 PTPRAP18433 802 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 JAG1P78504 1218 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 CCL15Q16663 113 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
ALPK3-202ENST00000558077 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.46■□□□□ 0.23
ALPK3-202ENST00000558077 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 ATAD5Q96QE3 1844 aa16.46■□□□□ 0.23
ALPK3-202ENST00000558077 MAGEB6P1A0A0J9YX57 407 aa16.45■□□□□ 0.22
ALPK3-202ENST00000558077 IGHDP01880 384 aa16.45■□□□□ 0.22
ALPK3-202ENST00000558077 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
ALPK3-202ENST00000558077 CERS3Q8IU89 383 aa16.45■□□□□ 0.22
ALPK3-202ENST00000558077 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
ALPK3-202ENST00000558077 ZNF296Q8WUU4 475 aaPredicted RBP16.45■□□□□ 0.22
ALPK3-202ENST00000558077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
ALPK3-202ENST00000558077 SAP30BPQ9UHR5 308 aaKnown RBP16.45■□□□□ 0.22
ALPK3-202ENST00000558077 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 CETPP11597 493 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 CRHR2Q13324 411 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 UBE3CQ15386 1083 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 FOXP4Q8IVH2 680 aaPredicted RBP16.44■□□□□ 0.22
ALPK3-202ENST00000558077 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 LCORLQ8N3X6 602 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 HERC5Q9UII4 1024 aaKnown RBP16.44■□□□□ 0.22
ALPK3-202ENST00000558077 AFG3L2Q9Y4W6 797 aa16.44■□□□□ 0.22
ALPK3-202ENST00000558077 CCDC85CA6NKD9 419 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 CXCL11O14625 94 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 CAP2P40123 477 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 CAP1Q01518 475 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 EVX2Q03828 476 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
ALPK3-202ENST00000558077 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 NAV1Q8NEY1 1877 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
ALPK3-202ENST00000558077 PRKAB2O43741 272 aa16.42■□□□□ 0.22
ALPK3-202ENST00000558077 USP5P45974 858 aa16.42■□□□□ 0.22
ALPK3-202ENST00000558077 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
ALPK3-202ENST00000558077 KBTBD3Q8NAB2 608 aa16.42■□□□□ 0.22
ALPK3-202ENST00000558077 MCOLN1Q9GZU1 580 aa16.42■□□□□ 0.22
ALPK3-202ENST00000558077 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
ALPK3-202ENST00000558077 BAZ2AQ9UIF9 1905 aaKnown RBP16.42■□□□□ 0.22
ALPK3-202ENST00000558077 PLCD1P51178 756 aa16.41■□□□□ 0.22
ALPK3-202ENST00000558077 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
ALPK3-202ENST00000558077 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
ALPK3-202ENST00000558077 SDR42E1Q8WUS8 393 aa16.41■□□□□ 0.22
ALPK3-202ENST00000558077 PUS7LQ9H0K6 701 aaKnown RBP16.41■□□□□ 0.22
ALPK3-202ENST00000558077 ZCCHC17Q9NP64 241 aaKnown RBP16.41■□□□□ 0.22
ALPK3-202ENST00000558077 DCP1AQ9NPI6 582 aaPredicted RBP16.41■□□□□ 0.22
ALPK3-202ENST00000558077 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
ALPK3-202ENST00000558077 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
ALPK3-202ENST00000558077 FKTNO75072 461 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 MBD4O95243 580 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 MX1P20591 662 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 GABPAQ06546 454 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 DGKZQ13574 1117 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 TATDN1Q6P1N9 297 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
ALPK3-202ENST00000558077 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 CRNKL1Q9BZJ0 848 aaKnown RBP16.4■□□□□ 0.22
ALPK3-202ENST00000558077 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
ALPK3-202ENST00000558077 EHD4Q9H223 541 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 PICK1Q9NRD5 415 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 ADGRA2Q96PE1 1338 aa16.4■□□□□ 0.22
ALPK3-202ENST00000558077 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
ALPK3-202ENST00000558077 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
ALPK3-202ENST00000558077 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
ALPK3-202ENST00000558077 CTU1Q7Z7A3 348 aaKnown RBP16.39■□□□□ 0.21
ALPK3-202ENST00000558077 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
ALPK3-202ENST00000558077 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
ALPK3-202ENST00000558077 RWDD1Q9H446 243 aaPredicted RBP16.39■□□□□ 0.21
ALPK3-202ENST00000558077 HLA-DOAP06340 250 aa16.38■□□□□ 0.21
ALPK3-202ENST00000558077 CYP2D6P10635 497 aa16.38■□□□□ 0.21
ALPK3-202ENST00000558077 PDE1AP54750 535 aa16.38■□□□□ 0.21
ALPK3-202ENST00000558077 IRX6P78412 446 aaPredicted RBP16.38■□□□□ 0.21
ALPK3-202ENST00000558077 SERPINB13Q9UIV8 391 aa16.38■□□□□ 0.21
ALPK3-202ENST00000558077 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 PDHXO00330 501 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 ERC2O15083 957 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
ALPK3-202ENST00000558077 TLR2O60603 784 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 GDF11O95390 407 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 SHMT1P34896 483 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 SPP2Q13103 211 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
ALPK3-202ENST00000558077 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
ALPK3-202ENST00000558077 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
ALPK3-202ENST00000558077 WDR18Q9BV38 432 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms